Escherichia coli O45 K1 H7 S88 (ExPEC): ECS88_4547
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Entry
ECS88_4547 CDS
T00830
Symbol
uvrA
Name
(GenBank) ATPase and DNA damage recognition protein of nucleotide excision repair excinuclease UvrABC
KO
K03701
excinuclease ABC subunit A
Organism
ecz
Escherichia coli O45:K1:H7 S88 (ExPEC)
Pathway
ecz03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
ecz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
ECS88_4547 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ecz03400
]
ECS88_4547 (uvrA)
DNA repair and recombination proteins [BR:
ecz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
ECS88_4547 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
ECS88_4547 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_DNA-bind
UvrA_inter
ABC_tran
SMC_N
AAA_16
AAA_29
nSTAND1
RsgA_GTPase
DnaJ_CXXCXGXG
AAA_23
AAA_25
AAA_21
NACHT
Viral_helicase1
cobW
ExoX-like_C
Motif
Other DBs
NCBI-ProteinID:
CAR05707
UniProt:
B7MJS5
LinkDB
All DBs
Position
complement(4526652..4529474)
Genome browser
AA seq
940 aa
AA seq
DB search
MDKIEVRGARTHNLKNINLVIPRDKLIVVTGLSGSGKSSLAFDTLYAEGQRRYVESLSAY
ARQFLSLMEKPDVDHIEGLSPAISIEQKSTSHNPRSTVGTITEIHDYLRLLYARVGEPRC
PDHDVPLAAQTVSQMVDNVLSQPEGKRLMLLAPIIKERKGEHTKTLENLASQGYIRARID
GEVCDLSDPPKLELQKKHTIEVVVDRFKVRDDLTQRLAESFETALELSGGTAVVADMDDP
KAEELLFSANFACPICGYSMRELEPRLFSFNNPAGACPTCDGLGVQQYFDPDRVIQNPEL
SLAGGAIRGWDRRNFYYFQMLKSLADHYKFDVEAPWGSLSANVHKVVLYGSGKENIEFKY
MNDRGDTSIRRHPFEGVLHNMERRYKETESSAVREELAKFISNRPCASCEGTRLRREARH
VYVENTPLPAISDMSIGHAMEFFNNLKLAGQRAKIAEKILKEIGDRLKFLVNVGLNYLTL
SRSAETLSGGEAQRIRLASQIGAGLVGVMYVLDEPSIGLHQRDNERLLGTLIHLRDLGNT
VIVVEHDEDAIRAADHVIDIGPGAGVHGGEVVAEGPLEAIMAVPESLTGQYMSGKRKIEV
PKKRVPANPEKVLKLTGARGNNLKDVTLTLPVGLFTCITGVSGSGKSTLINDTLFPIAQR
QLNGATIAEPAPYRDIQGLEHFDKVIDIDQSPIGRTPRSNPATYTGVFTPVRELFAGVPE
SRARGYTPGRFSFNVRGGRCEACQGDGVIKVEMHFLPDIYVPCDQCKGKRYNRETLEIKY
KGKTIHEVLDMTIEEAREFFDAVPALARKLQTLMDVGLTYIRLGQSATTLSGGEAQRVKL
ARELSKRGTGQTLYILDEPTTGLHFADIQQLLDVLHKLRDQGNTIVVIEHNLDVIKTADW
IVDLGPEGGSGGGEILVSGTPETVAECEASHTARFLKPML
NT seq
2823 nt
NT seq
+upstream
nt +downstream
nt
atggataagatcgaagttcggggcgcccgcacccataatctcaaaaacatcaacctcgtt
atcccccgcgacaagcttattgtcgtgaccgggctttcgggttctggcaaatcctcgctc
gctttcgacaccttatatgccgaagggcagcgccgttacgttgaatccctttccgcctac
gcgcggcagtttctgtcactgatggagaagccggacgtcgaccatattgaagggctttct
cctgccatctcaattgagcagaaatcgacgtctcataacccgcgctctacggtggggaca
atcaccgaaatccacgactatttgcgtctgctgtacgctcgcgttggtgagccgcgctgc
ccggaccacgatgtaccgctggcggcgcaaaccgtcagtcagatggtggataacgtgttg
tcccagccggaaggcaagcgtctgatgctgctcgcgccaatcattaaagagcgcaaaggc
gaacacaccaaaacgctggagaacctggcaagccagggttacatccgtgctcgtattgat
ggcgaagtctgcgatctttccgatccgccgaaactggaactgcaaaagaaacataccatt
gaagtggtggttgatcgcttcaaagtgcgtgacgatcttacccaacgtcttgccgagtcg
tttgaaaccgcgctggagctttccggtggtaccgcggtagtggcggatatggacgacccg
aaagcggaagagctgctgttctccgccaactttgcctgcccgatttgcggttacagtatg
cgcgagctggaacctcgcctgttttcatttaacaacccggcgggagcctgcccgacctgt
gacggtcttggcgtacagcaatatttcgatcctgaccgcgtgatccagaatccggaattg
tcgctggctggcggtgcgatccgtggctgggatcgccgcaacttctattatttccagatg
ctgaaatcgctggcagatcactataagttcgacgtcgaagcgccgtggggcagcctgagc
gcgaacgtgcataaagtggtgttgtacggttctggcaaagaaaacattgaattcaaatac
atgaacgatcgtggcgatacctccattcgtcgtcatccgttcgaaggcgtgctgcacaat
atggagcgccgttataaagagacggaatccagcgcggtacgtgaagaattagccaagttt
atcagcaatcgtccgtgcgccagctgcgaaggaacccgtctgcgtcgggaagcacgccac
gtgtatgtcgagaatacgccgctgcccgccatctccgacatgagcatcggtcatgcgatg
gaattcttcaacaatctcaaactcgcaggtcagcgggcgaagattgcagaaaaaatcctt
aaagagatcggcgatcgtctgaaattcctcgttaacgtcggcctgaattacctgacactt
tcccgctcagcagagacactttccggcggtgaagcccagcgtattcgtctggcgagccag
attggtgcaggcctggttggcgtgatgtacgtgctggatgagccgtctatcggcctgcac
cagcgcgataacgagcgcctgttgggtacgcttatccatctgcgcgatctcggtaatacc
gtgattgtggtggagcacgacgaagacgcgattcgcgccgctgatcatgtgatcgatatc
ggtccgggtgcgggtgttcacggcggtgaagtggtcgcggaaggtccactggaagcgatt
atggcggtgcctgagtcgttgaccgggcagtacatgagcggtaaacgcaagattgaggtg
ccgaagaaacgcgtacccgccaatccagaaaaagtgctgaaactgacgggcgcacgcggc
aacaacctgaaagacgtgacgctgacgctgccggtaggtctgtttacctgcatcacaggg
gtttcaggttccggtaaatcgacgctgattaacgacacactgttcccgattgcccaacgc
cagttgaatggtgcgaccatcgccgaaccggcaccgtatcgcgatattcagggactggag
catttcgataaagtgatcgatatcgaccaaagcccaattggtcgtactccgcgttctaac
ccggcgacctataccggcgtgtttacacctgtgcgcgaactgtttgcgggcgtaccggaa
tcccgtgcgcgcggctatacgccaggacgtttcagctttaacgtccgtggcggacgctgc
gaggcctgtcagggcgacggcgtgatcaaagtggagatgcacttcctgccggacatttac
gtaccgtgcgaccagtgcaaaggcaaacgctataaccgtgaaacgctggagattaagtac
aaaggcaaaaccatccacgaagtgctggatatgaccatcgaagaggcgcgtgagttcttt
gatgcggtgccagctctggcgcgtaagctgcaaacgttgatggacgttggcctgacgtac
attcgcctcgggcagtccgcaaccacactttctggtggtgaagcccagcgcgtgaagctg
gcgcgtgagctgtcaaaacgcggcaccgggcagacgctgtatattctcgacgagccgacc
accggtctgcacttcgccgatattcagcaactgctcgacgtactgcataaactgcgcgat
cagggcaataccattgtggtaattgagcacaatctcgacgtgatcaaaaccgctgactgg
attgtcgacctgggaccggaaggcggcagtgggggcggcgaaatcctcgtctccggtacg
ccagaaaccgtcgcagagtgcgaagcttcgcatacggcgcgcttcctcaagccgatgctg
taa
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