Escherichia coli DH1: ECDH1ME8569_2578
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Entry
ECDH1ME8569_2578 CDS
T02102
Symbol
gabT
Name
(GenBank) 4-aminobutyrate aminotransferase
KO
K07250
4-aminobutyrate aminotransferase / (S)-3-amino-2-methylpropionate transaminase / 5-aminovalerate transaminase [EC:
2.6.1.19
2.6.1.22
2.6.1.48
]
Organism
edj
Escherichia coli DH1
Pathway
edj00250
Alanine, aspartate and glutamate metabolism
edj00280
Valine, leucine and isoleucine degradation
edj00310
Lysine degradation
edj00410
beta-Alanine metabolism
edj00640
Propanoate metabolism
edj00650
Butanoate metabolism
edj01100
Metabolic pathways
edj01120
Microbial metabolism in diverse environments
Module
edj_M00027
GABA (gamma-Aminobutyrate) shunt
edj_M00956
Lysine degradation, bacteria, L-lysine => succinate
Brite
KEGG Orthology (KO) [BR:
edj00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
ECDH1ME8569_2578 (gabT)
00650 Butanoate metabolism
ECDH1ME8569_2578 (gabT)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
ECDH1ME8569_2578 (gabT)
00280 Valine, leucine and isoleucine degradation
ECDH1ME8569_2578 (gabT)
00310 Lysine degradation
ECDH1ME8569_2578 (gabT)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
ECDH1ME8569_2578 (gabT)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
edj01007
]
ECDH1ME8569_2578 (gabT)
Enzymes [BR:
edj01000
]
2. Transferases
2.6 Transferring nitrogenous groups
2.6.1 Transaminases
2.6.1.19 4-aminobutyrate---2-oxoglutarate transaminase
ECDH1ME8569_2578 (gabT)
2.6.1.22 (S)-3-amino-2-methylpropionate transaminase
ECDH1ME8569_2578 (gabT)
2.6.1.48 5-aminovalerate transaminase
ECDH1ME8569_2578 (gabT)
Amino acid related enzymes [BR:
edj01007
]
Aminotransferase (transaminase)
Class III
ECDH1ME8569_2578 (gabT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_3
AP_endonuc_2
Aminotran_1_2
Motif
Other DBs
NCBI-ProteinID:
BAJ44434
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Position
2770644..2771924
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AA seq
426 aa
AA seq
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MNSNKELMQRRSQAIPRGVGQIHPIFADRAENCRVWDVEGREYLDFAGGIAVLNTGHLHP
KVVAAVEAQLKKLSHTCFQVLAYEPYLELCEIMNQKVPGDFAKKTLLVTTGSEAVENAVK
IARAATKRSGTIAFSGAYHGRTHYTLALTGKVNPYSAGMGLMPGHVYRALYPCPLHGISE
DDAIASIHRIFKNDAAPEDIAAIVIEPVQGEGGFYASSPAFMQRLRALCDEHGIMLIADE
VQSGAGRTGTLFAMEQMGVAPDLTTFAKSIAGGFPLAGVTGRAEVMDAVAPGGLGGTYAG
NPIACVAALEVLKVFEQENLLQKANDLGQKLKDGLLAIAEKHPEIGDVRGLGAMIAIELF
EDGDHNKPDAKLTAEIVARARDKGLILLSCGPYYNVLRILVPLTIEDAQIRQGLEIISQC
FDEAKQ
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaacagcaataaagagttaatgcagcgccgcagtcaggcgattccccgtggcgttggg
caaattcacccgattttcgctgaccgcgcggaaaactgccgggtgtgggacgttgaaggc
cgtgagtatcttgatttcgcgggcgggattgcggtgctcaataccgggcacctgcatccg
aaggtggtggccgcggtggaagcgcagttgaaaaaactgtcgcacacctgcttccaggtg
ctggcttacgagccgtatctggagctgtgcgagattatgaatcagaaggtgccgggcgat
ttcgccaagaaaacgctgctggttacgaccggttccgaagcggtggaaaacgcggtaaaa
atcgcccgcgccgccaccaaacgtagcggcaccatcgcttttagcggcgcgtatcacggg
cgcacgcattacacgctggcgctgaccggcaaggtgaatccgtactctgcgggcatgggg
ctgatgccgggtcatgtttatcgcgcgctttatccttgcccgctgcacggcataagcgag
gatgacgctatcgccagcatccaccggatcttcaaaaatgatgccgcgccggaagatatc
gccgccatcgtgattgagccggttcagggcgaaggcggtttctacgcctcgtcgccagcc
tttatgcagcgtttacgcgctctgtgtgacgagcacgggatcatgctgattgccgatgaa
gtgcagagcggcgcggggcgtaccggcacgctgtttgcgatggagcagatgggcgttgcg
ccggatcttaccacctttgcgaaatcgatcgcgggcggcttcccgctggcgggcgtcacc
gggcgcgcggaagtaatggatgccgtcgctccaggcggtctgggcggcacctatgcgggt
aacccgattgcctgcgtggctgcgctggaagtgttgaaggtgtttgagcaggaaaatctg
ctgcaaaaagccaacgatctggggcagaagttgaaagacggattgctggcgatagccgaa
aaacacccggagatcggcgacgtacgcgggctgggggcgatgatcgccattgagctgttt
gaagacggcgatcacaacaagccggacgccaaactcaccgccgagatcgtggctcgcgcc
cgcgataaaggcctgattcttctctcctgcggcccgtattacaacgtgctgcgcatcctt
gtaccgctcaccattgaagacgctcagatccgtcagggtctggagatcatcagccagtgt
tttgatgaggcgaagcagtag
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