Endozoicomonas euniceicola: NX720_18455
Help
Entry
NX720_18455 CDS
T08536
Symbol
tssF
Name
(GenBank) type VI secretion system baseplate subunit TssF
Organism
eei
Endozoicomonas euniceicola
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
T6SS_TssF
Motif
Other DBs
NCBI-ProteinID:
UYM14853
LinkDB
All DBs
Position
4581027..4582817
Genome browser
AA seq
596 aa
AA seq
DB search
MANTLMSWYERELSFLYAEARAFAEEHPQLASHLGVSYDSVSDPHVARLLESFALINARL
SRQLAEGSTQLSGSLLNIVFPMCLQSLPSTSMIQIAPSKEQPQVATLPSGTRFRAYVNKD
QFCLFRTTRDMQLCPFDIVDHQFESRPFVLSDIDYPESSTALLKLELAMLDESRSFSNLS
PFSEVTIHFQGLARHQAQMYDYLMRHRCQMVLANGSEQQVTLSMGQFAAVGFTGRDSMIT
HDNCTFLDYQMMLELFAWPELFFGFRLLDIGNALRQFACQRVTLLLFLEDTVDEQVATLS
SIRYSLGCAPVINLFEHIAEPVVVDHRQLSYQLVPDTHSANTLEVQSVQKVLDITGEQPE
LLPPLYGLKHNDTEHNRFWLYHPPETDSDACGQLSVVYPELQMNKNQTMVLSPHLICNNG
MQVLELPDNPRLECLDSIALPVAAKMIMRPTARIRRKQNIKNRLNLLVHLKGAFTSVLQG
RDPAGDLRTLMYVYCLRNNSVSTAWLDSLVQMQPRPLVAPLRISGHQCFTQGIELIIELD
PSRLKQVSIMMFVNLIDFMVAGYAGYHSFIEVVIRLKGDSGDYMRCTRRHGYQINR
NT seq
1791 nt
NT seq
+upstream
nt +downstream
nt
ttggctaacactctgatgtcctggtacgagcgggaattaagctttctgtacgctgaagcg
agggcatttgcagaggagcacccgcaactggccagtcaccttggggtcagctatgactcg
gtatccgatccccatgtggcgcggctgcttgaatctttcgccttgattaatgcccgactg
tcgcggcagctcgcagaaggatcaacccagctttccggcagcctgctgaatattgttttt
cccatgtgcctgcaatctctgccttcgaccagtatgattcagattgcaccttcaaaagag
cagccacaggtggcaacgctgccttcaggtacccggttcagagcctacgttaataaagat
cagttctgcctgtttcgtacgacacgggatatgcaactgtgtccgtttgatatcgttgat
caccagtttgaatcaagaccgtttgtcctttcagacattgattaccccgaatcatccacc
gctttattaaaactggaactggctatgttggatgaatcgcgcagtttttctaatttgtca
cctttttcagaagtcactattcattttcaggggctggcgcggcatcaggctcagatgtac
gactaccttatgcgacatcgctgccagatggttctggctaatggcagtgagcagcaggtg
accctgtctatgggacaattcgcagcggtagggtttaccgggcgggactctatgatcacc
catgacaactgtaccttccttgattatcagatgatgctggagctgtttgcctggccagag
ttgttttttggttttcgcctgttggatatcggcaatgctctgcggcagtttgcctgtcag
cgggtgactctgctgctgtttctggaagataccgttgatgagcaggtggcaacccttagt
agcattcgctatagcctgggctgtgcgcctgttattaacctgtttgagcatattgcagaa
ccagtggtcgtcgatcaccgtcagctgagctaccagctggtacccgatacccattctgcc
aacaccctggaagtgcagtcggttcaaaaggtgctggatattaccggcgagcagccagaa
ctactgccgcctttgtatggcctgaagcataatgatacagagcataaccggttctggctt
taccatccgccagaaaccgatagtgatgcatgtggacagctatcagtggtttatccggaa
cttcagatgaataaaaaccagacaatggttctgtcaccccatctgatctgtaacaacggg
atgcaggttctggagttacccgataatccaaggctggaatgtctggacagtattgcactc
cctgtcgccgctaaaatgattatgcgaccaacggcaagaatacgacgtaagcaaaatatt
aagaaccgcctgaacctgctggtgcatctgaaaggcgcttttacctcggtgttgcagggc
agagaccctgccggtgaccttcgtaccctgatgtatgtgtattgcctgcgcaataactca
gtcagcaccgcctggcttgattctctggtgcaaatgcagcctcggcctctggttgcgccg
ctacgcattagtggacatcagtgttttacccagggcattgagttaatcattgagctggat
ccctcaaggctcaaacaggtcagcatcatgatgttcgtcaatctgattgattttatggtg
gcgggttatgcgggttatcacagttttattgaagtggtcattcgcctcaaaggtgattcc
ggagactacatgcgatgtacacgccgacatggttatcagatcaatcgctga
DBGET
integrated database retrieval system
