Escherichia fergusonii: EFER_1277
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Entry
EFER_1277 CDS
T00811
Symbol
ycfS
Name
(GenBank) conserved hypothetical protein
KO
K19236
L,D-transpeptidase YcfS
Organism
efe
Escherichia fergusonii
Pathway
efe01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
EFER_1277 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
efe01002
]
EFER_1277 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
efe01011
]
EFER_1277 (ycfS)
Peptidases and inhibitors [BR:
efe01002
]
Cysteine peptidases
Family C82
EFER_1277 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
efe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
EFER_1277 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
CAQ88801
UniProt:
B7LPP8
LinkDB
All DBs
Position
complement(1313809..1314789)
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AA seq
326 aa
AA seq
DB search
MVMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAI
AKKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINLAELRLYYYPPG
KNSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAG
PDNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSHVTPGTKVK
IINTPIKASAEPNGARLVEVHQPLSEKIDDDPQLLPITLNGSMQAFKDAAQTDADVMQHV
MDVRSGMPVDVRRHNTGNNTIHSLAL
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
ttggtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgcc
gtggcgctggcgctaccggcaaaagccaacacctggccgctaccgcctgccggcagtcgt
ctggttggtgaaaataaatttcatgtagtggaaaatgacggtggttctctggaagccatc
gccaaaaaatataacgtcggctttctcgctctgttacaggctaaccctggcgttgatcct
tacgtaccgcgcgcgggtagcgtgttaacgatcccgttgcaaaccctacttccagacgcg
ccgcgcgaaggcattgtgattaaccttgcagaactgcgtctctattattatccgccagga
aaaaattcggtaaccgtgtatcccatcggcattggtcagttgggtggtgacacgctgaca
ccgacaatggtgaccaccgtttctgacaagcgtgcaaacccaacctggacgccaacggca
aacattcgcgcgcggtataaggcacagggaattgagttgcctgcggtagttccggctgga
ccggataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttg
cttcacggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcga
ctgcgcgatgatgatattaaaacacttttcagccacgttactcctggcaccaaagtgaag
attatcaatacgccaataaaggcgtcggcagaaccaaacggtgcgcgtctggttgaagtg
catcaaccactttcagagaaaattgatgatgatccacagctgttgccaatcacgctaaac
ggctcaatgcaggcgtttaaagatgcggcgcaaaccgacgccgatgtcatgcaacatgtg
atggatgtccgttccgggatgccagtggatgttcgtcggcacaataccgggaacaatacg
attcatagcctggcgctataa
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