Escherichia fergusonii: EFER_1936
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Entry
EFER_1936 CDS
T00811
Symbol
rcsA
Name
(GenBank) DNA-binding transcriptional activator, co-regulator with RcsB
KO
K07781
LuxR family transcriptional regulator, capsular biosynthesis positive transcription factor
Organism
efe
Escherichia fergusonii
Pathway
efe02020
Two-component system
efe02024
Quorum sensing
efe02026
Biofilm formation - Escherichia coli
Brite
KEGG Orthology (KO) [BR:
efe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
EFER_1936 (rcsA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
EFER_1936 (rcsA)
02026 Biofilm formation - Escherichia coli
EFER_1936 (rcsA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
efe03000
]
EFER_1936 (rcsA)
Transcription factors [BR:
efe03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
EFER_1936 (rcsA)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GerE
Motif
Other DBs
NCBI-ProteinID:
CAQ89445
UniProt:
B7LTN8
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All DBs
Position
1986438..1987061
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AA seq
207 aa
AA seq
DB search
MSTIIMDLCSYTRLGLTGYLVSRGVKKREINDIESVDQLKVACDLHHPSVVFINEDCFIH
DPANSQHIKQIINQHPNTLFIVFMAIANIHFDEYLLVRKNLLISSKSIKPESLDDILGDI
LKKEVDIASVINLPTLSLSRTESSMLRMWMAGQGTIQISDQMNIKAKTVSSHKGNIKRKI
KTHNKQVIYHVVRLTDNVTNGIFVNMR
NT seq
624 nt
NT seq
+upstream
nt +downstream
nt
atgtcaacgattattatggatctatgcagttacacccggctgggtttgaccgggtatctt
gttagcagaggggttaagaaaagggaaatcaacgacatcgaaagcgttgatcaacttaag
gtcgcttgtgacttacatcatccttcagtggtgtttattaatgaagactgttttatccat
gacccggcaaacagtcagcacatcaagcaaatcattaatcaacatcccaacactttattt
attgtatttatggcgattgccaatatccattttgatgagtatctgcttgtccgcaaaaat
ttattgatcagttccaagtcgattaaaccggaatctcttgacgatatccttggcgatatt
ctgaaaaaagaggtcgatattgccagtgtaattaatttacccacgttatcattaagtcga
actgaatcaagcatgttacgtatgtggatggcaggccagggtacgattcagatttctgac
cagatgaatatcaaggctaaaacggtatcgtcacacaagggaaatattaaacgtaagatt
aaaacgcataataaacaggttatttatcatgtggtacgtttaacagacaatgtaactaac
ggtatatttgttaatatgcgctaa
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