Epinephelus fuscoguttatus (brown-marbled grouper): 125880380
Help
Entry
125880380 CDS
T08419
Symbol
itgb4
Name
(RefSeq) integrin beta-4 isoform X1
KO
K06525
integrin beta 4
Organism
efo
Epinephelus fuscoguttatus (brown-marbled grouper)
Pathway
efo04510
Focal adhesion
efo04512
ECM-receptor interaction
efo04810
Regulation of actin cytoskeleton
efo04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
efo00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
125880380 (itgb4)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
125880380 (itgb4)
09142 Cell motility
04820 Cytoskeleton in muscle cells
125880380 (itgb4)
04810 Regulation of actin cytoskeleton
125880380 (itgb4)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
efo04147
]
125880380 (itgb4)
04515 Cell adhesion molecules [BR:
efo04515
]
125880380 (itgb4)
04090 CD molecules [BR:
efo04090
]
125880380 (itgb4)
Exosome [BR:
efo04147
]
Exosomal proteins
Exosomal proteins of colorectal cancer cells
125880380 (itgb4)
Exosomal proteins of bladder cancer cells
125880380 (itgb4)
Cell adhesion molecules [BR:
efo04515
]
Integrins
Integrin beta subunits
125880380 (itgb4)
CD molecules [BR:
efo04090
]
Proteins
125880380 (itgb4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Integrin_beta
fn3
Calx-beta
Pur_ac_phosph_N
Integrin_B_tail
PSI_integrin
I-EGF_1
EGF_2
EGF_Tenascin
SEA
Motif
Other DBs
NCBI-GeneID:
125880380
NCBI-ProteinID:
XP_049418726
LinkDB
All DBs
Position
LG20:9350412..9381144
Genome browser
AA seq
1940 aa
AA seq
DB search
MGRWTLHLSVGLGLLAVLLNYYCAEANYCFDARDESCSVCLQSGKDCAYCFEETFVGPRC
DLHQNIIAHGCSAAAILTAAGYMKVEKSQSINTALAQSQVSPQQLRMKLLPGEEKLLDVE
VFAPTKGPLDLYILMDFSNSMADDLDNLKRMGTKLGELVKELSNDPTIGFGKFVDKVIEP
QTDMRPEKLRKPWPNSDPPFSFQNVIKLTPDVPFFNSELQNETISGNLDAPEGGFDAILQ
AAVCGDEIGWRDLATHLLVFSTESAFHYESDGANVLSGILKRNDELCHIKDGKYKNATNQ
DYPSIPTLVRVLGKHNIIPIFAVTNHSYTYYKKLQTYFPIAEVGLLQEDSSNILQVMEAA
FKSIRSKMSIRTEDKPKAFEAQYLSSGVYSDFKDFNLDPGSVGKFKMLVKAQRMIDEQPV
CQRTKDEKEGTMRVKPTTFNAALNIKASVLCPTCECEQSVTPKAPRCYGNGDLVCGRCEC
YDDWVGTFCNCSASTSSNDNSQCIGPGMKEPCSGRGDCLVCGTCVCHNPEQFEGPYCQYD
KTQCPRFGGFLCNERGSCVMGQCACTSGWEGDACECPKSNLTCLDNDGGICNGRGKCLCG
RCQCPDSGIEMTATCESNFQAQLGVCEATRSCVQCWAWKTGEKKDPEECKKCPFKFKFVD
ELKEESKVLDSCSFRDEDDDCTYQYTVENSADRNVKDLEVQVLEKKDCPAASLLWLLPLL
LFLLLLLALLLLCCWKFCPCCKTCCQSCLALLPCCNRGRKVGFKEDEYLLRQSLLTSDHL
DTPMVRTGPPKGTDVVRWKVTDNVHRPPNHPQALIKPNPKETIQFPISLRLNRLFSENLS
RPESRDAEQLRKDVSDNLNELYKQIPGAQKVQKTAFRMQRNAGKRQDYTIMDTVLAAPRS
SYPDIVKLTEKNVQSGNVRDLKVVPGYYTVATDREATGAIEFQEGVESVDVHVPLFVKDE
DDDKKQLQVEAIDVPLGIAEIGKRLVNITIIKEHASSIFTFLQPAYTYSRQDGVANIPIS
REIIDDGRTQVTYRTRDQTAKDKKDYVATEGDLTYGPGETQKIVPVRLLELSEKDGLLED
KQVKQFVMDLSNPRQGAKLGRYPRTVVTIADQPEPSVIMFKKGTQNFTTSDPTYTIPVVR
TRNQDSPATVKWRTKKAQRFELSGPLKFSPGETEKNITIDPKAHPGPVQPETFHLELFDP
SSNTSIGERKTTLVNVTDGVARSPETAQLQQKGFVSPKATSPGGYLLSPTNLKAKATGPR
NIRLNWDPVSGNPLGYKVKYWIYGDPEKDAQVLDVKTPQAELTNLYPYCDYEMRVCGYNA
MGDGRETDIVSCQTLEDVPGEPGRLAFNVISPTVTQLSWAEPAETNGNITAYEVIYTPID
DDMKPVGAAKKVKIDNPKKRMLLIENLQDAQTYQYKVRAMNSVGWGPFRDATINLASQPA
RPLSIPIIPDIPIVDAEAGDEYDSYLMYSNEVLKSPAGSKTPSVSGDDYMMNGKWDQNFL
FPGGSATRNLSASSSPMSTLSSNYRTGGGSYTTETTTTYLSGPGGVRRPDMMGGVHTSEV
IMRKRSENRGYTDENIRDSIVMGDVSGKFPDLGGFGYTGMQSSSQSQFSYSLSQGPRART
QSSDVNEALYNLDRVLQDARLSPGVPDTPSRLVFSALGPTALKVSWQEPHCEKDILGYSV
LYQLLNGGEMKRINVTNPAENSVIIQDLLPNHSYLFKVKAQSQEGWGPEREGVITIESAV
DPKSPLSPMPGSPFTLSTPSAPGPLVFTALSPDSLQLSWEKPRKPNGDILGYVVTCEQLH
GGGDVRSFQVNGDSAETSLTVPNLTENVPYKFKVQAQTTQGFGPEREGIITIESQDGGAM
SGYSSQAMTRREVFQLPTEVSTRTNVSHTMLNDPYYSDGMMMTTQLSETSGMVTRQVTKE
VVQRSVMGGTTVTKKMFYES
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggggagatggacgttacatctgtcagtgggactcgggctactagccgtcctgttgaac
tactattgtgctgaagccaactactgcttcgatgccagggatgagagctgttcagtatgc
ctgcagtctgggaaagactgtgcctactgctttgaggagacctttgttggccctcgctgt
gacttgcaccagaatataattgcccatggctgcagtgctgcggctattctcacagctgca
ggttatatgaaggtagaaaaaagtcaatcaatcaacacagcgcttgcgcagtctcaagtg
tctccacagcagctgagaatgaagcttctgccaggagaggagaagctgctggacgtggaa
gtgtttgcgccaaccaaaggccctctggacctttatattcttatggacttctccaattcc
atggctgacgatttggacaacttgaagagaatgggcacaaagctgggtgaattggttaaa
gaattgtcaaacgaccccaccattgggtttggaaagtttgtggacaaagtgatcgagccc
cagaccgacatgagacctgaaaaacttagaaagccttggcccaacagcgaccctccattc
tctttccaaaatgtcatcaagctgacccccgacgtgccgttcttcaactctgagctccaa
aacgaaacaatatctggcaaccttgatgctcctgagggaggttttgatgccatattacag
gctgcagtttgtggggatgagattggctggcgtgacctcgcaacgcatctcctggtgttc
tccactgagtcagccttccactacgaatctgacggtgctaacgtgctgtcaggcatcctg
aagcgcaatgacgagctctgccacatcaaggacggcaaatataaaaacgctacaaatcag
gattacccttcaatacccacattggtccgagtgctgggcaaacacaatatcattcccatc
tttgctgtcaccaaccactcctacacctactacaagaaactgcaaacgtatttccccatt
gctgaggtcggtctgctgcaagaagactcatccaatatcctgcaggtcatggaggctgcc
ttcaagagtatccgttctaagatgagcatccgtacagaggacaagcccaaggctttcgag
gcacagtacttgtccagtggagtctattcagatttcaaggactttaatctcgaccctgga
tcagtagggaaattcaagatgctggtcaaagcccagcgaatgattgatgagcagcctgtc
tgtcagaggactaaggatgaaaaagaggggacaatgagagtaaaacctacaacctttaac
gctgccctcaacattaaggcctcagttctgtgtccaacctgcgaatgcgagcagtccgtc
accccaaaggcacccaggtgttacggcaacggagacctggtgtgtgggaggtgtgagtgc
tatgatgactgggtgggtacattctgtaactgctcagcgagtacttcgtctaatgacaac
agccagtgtataggtccgggcatgaaggagccttgctcaggccgtggggactgcctggtg
tgtggaacctgtgtgtgtcataacccagaacagtttgaaggaccttactgtcagtacgac
aagactcagtgtccaagatttggaggcttcctctgcaatgaacgtggctcttgcgttatg
ggtcagtgtgcatgtacttcgggctgggagggagatgcctgcgagtgtcccaagagcaac
ctgacctgtctggataatgatggcggtatctgcaacgggcgaggtaaatgcttgtgtggc
cgctgtcagtgtcccgactctggtatcgaaatgactgcaacctgtgagtcaaatttccag
gcccagttgggcgtgtgcgaggctacaaggagttgtgtccagtgttgggcctggaagaca
ggagagaagaaagatccagaggagtgtaaaaagtgtcccttcaaatttaaatttgtggat
gaactcaaagaagagagcaaggtgcttgattcgtgcagtttccgtgacgaggatgatgac
tgtacgtaccaatacactgtcgaaaactctgcagatcgcaatgtcaaagacttggaggtc
caggtgctcgaaaagaaagattgtcctgctgctagccttctgtggttgctcccactcctc
ttgttcctcttattactgctggcactcctgctgctctgctgttggaaattctgcccctgc
tgcaaaacctgctgtcagagctgtcttgccctgctgccttgctgtaatagaggtcgcaag
gttggcttcaaggaagatgagtatttgctccgccagtctctgctcacctcagaccacctg
gacacaccaatggtaaggaccggcccacccaaaggaaccgatgtggttcgctggaaggtc
acggataatgtacaccgaccaccaaatcaccctcaggctctgattaaacccaaccctaaa
gagacaatccagttcccgatctccctccgactcaacaggttgttctccgagaacctgtct
cgccccgaatccagagacgctgaacagctccgcaaggacgtgtccgataacctaaatgag
ctgtacaagcaaattcctggcgcccagaaggtgcaaaaaactgcattcagaatgcagaga
aatgccggaaaaaggcaggactacaccatcatggacactgtcttagctgctccccgcagt
agctaccctgatattgtcaaactcactgagaaaaatgtccagtctggaaacgttcgtgat
ctcaaagtggtgcccggctattacactgtggccacagacagagaggccacgggagccata
gagttccaagagggcgtagagtcagtagacgttcacgtgcctctctttgtcaaggatgaa
gatgatgacaagaagcagctacaggtggaggccatagatgtgccactgggcattgctgag
attggaaaacgtttggtcaacatcaccatcatcaaagagcatgcctccagtatcttcacc
ttcctccagccagcctacacctacagtaggcaagatggagtggctaacatcccaattagc
agagagatcatagacgatggacgcacacaggtcacgtaccgcacacgggaccaaactgcc
aaggataagaaggactatgtggctacggaaggagacttgacctatggtcctggtgagacc
cagaaaatagtgcctgttcgtctgctagagctgtctgagaaagatggcctcctagaagac
aaacaggtcaagcagtttgtcatggatctcagtaacccacggcagggtgccaagctggga
cgctacccgagaactgttgtcaccattgcagaccaaccagagcccagtgtgattatgttc
aaaaagggcactcagaacttcaccacatctgacccaacctacaccatccctgtggtccgc
actcgcaaccaggacagccctgcaacagtgaaatggcgcaccaagaaggcccagcgcttt
gagttgtctggccctctaaagttcagtccaggagagacagagaagaacataacaatcgac
ccaaaggcccaccctggcccagttcagccagagaccttccacttagagctgtttgaccca
agtagcaacacttctatcggagagaggaagaccacccttgtcaatgtcactgatggagtt
gccagatctccagagacggcccagttgcagcagaagggttttgtaagcccgaaagccacc
agccctggtggttaccttctctccccaacaaaccttaaggccaaagcaactggacccaga
aacatccgcctcaactgggacccagtgtctggtaaccccttggggtacaaggtaaagtat
tggatctatggtgacccagagaaagatgcccaggtcttagatgtgaagactcctcaagcc
gaattgaccaatctgtatccctattgtgactatgagatgcgagtgtgtggctacaatgca
atgggagatggccgcgagacagacattgttagctgtcaaacactggaggatgtccctggt
gaacctggacgtctggccttcaacgtcatcagtccaactgtcactcagctcagctgggcg
gagcctgcagagaccaatggcaacattaccgcttatgaggtcatctacacacccattgat
gatgatatgaagccagtgggcgccgctaagaaagtaaagattgacaaccccaagaagcga
atgctgctgattgagaatctccaggacgcccagacctaccagtacaaggtccgtgccatg
aatagcgtaggctggggcccattcagagatgctaccatcaatctggcatcacagcctgcc
agacctctgtccattcccatcattccagatatccctattgtggatgcagaggccggagat
gagtatgacagctacctgatgtacagcaatgaggtgctgaagtcccctgcaggctccaag
acacccagcgtctctggtgatgattacatgatgaatgggaagtgggaccagaacttcctt
ttcccaggaggatcagcgacacgcaacttgtccgcatcgtcatctcctatgtccactctg
agctcaaactacagaacgggaggcggctcctataccacagaaacaaccaccacctacctg
tccggaccaggaggtgttcgtagacctgacatgatgggaggagtacacacatcagaggtc
atcatgaggaagcgctcagagaacaggggttacacagatgaaaacatccgggactccatc
gtcatgggagacgtgtcgggcaagttcccagatctaggtggtttcggttacactgggatg
cagagcagctctcagagccagttcagctacagcctgtcacagggtccaagggccaggacc
cagtcttcagacgtcaatgaagccctatataatctggacagggttctccaggatgctcga
ctttctccaggtgtaccagacactcccagcagacttgtgttctctgctcttggtcccacc
gccctcaaagtcagctggcaggagcctcactgtgagaaagacatcctgggctactctgtg
ctctaccagctgctcaatggaggtgagatgaagcgcattaatgtgacaaaccctgcagag
aactctgtaatcatccaggacctgctgcctaaccactcctacctattcaaggtgaaggct
cagagccaggagggctggggcccagagagagagggagtcatcaccatcgagtccgctgtc
gaccccaagagtcccctcagccccatgccaggctcaccctttactctgagcactcccagt
gccccaggccccctggtcttcaccgctctgagccctgattccctgcagctcagctgggag
aaacctcgtaaacccaacggagacatcctgggctacgtggtcacctgcgaacagctgcat
ggtggaggagacgtacgttccttccaggtgaacggggacagtgccgagaccagtctgacc
gtcccaaacctgactgagaatgttccctacaagtttaaagttcaggctcaaaccacacag
ggcttcggtcctgagagggagggcatcatcaccatcgagtctcaggatggaggtgctatg
tctgggtacagcagccaagcaatgacaaggagggaagttttccagttgccgacagaggtc
agcacacggaccaatgtctcccacaccatgctcaacgacccctactactcagatgggatg
atgatgaccacacagctctcagagaccagtggcatggtgacccgtcaagtcaccaaggaa
gtggttcagaggagcgtcatgggaggaaccaccgtcacaaagaagatgttttatgaatct
taa
DBGET
integrated database retrieval system
