Enterococcus faecium DO: HMPREF0351_10005
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Entry
HMPREF0351_10005 CDS
T02120
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
efu
Enterococcus faecium DO
Brite
KEGG Orthology (KO) [BR:
efu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
efu03032
]
HMPREF0351_10005 (gyrB)
03400 DNA repair and recombination proteins [BR:
efu03400
]
HMPREF0351_10005 (gyrB)
Enzymes [BR:
efu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
HMPREF0351_10005 (gyrB)
DNA replication proteins [BR:
efu03032
]
Prokaryotic type
DNA Topoisomerases
HMPREF0351_10005 (gyrB)
DNA repair and recombination proteins [BR:
efu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HMPREF0351_10005 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AFK57629
UniProt:
Q3XZE2
LinkDB
All DBs
Position
4312..6258
Genome browser
AA seq
648 aa
AA seq
DB search
MTEERSLVERAKEYDASQIQVLEGLEAVRKRPGMYIGSTSSEGLHHLVWEIVDNSIDEVL
AGFATKIHVIIEKDNSITVIDDGRGIPVDIQAKTGRPAVETVFTVLHAGGKFGGGGYKVS
GGLHGVGSSVVNALSTQLDVKVYKEGNVYYQEYRRGAVVDDLKIIEQTDRHGTTVHFTPD
PEIFTETTEFDFSKLATRIRELAFLNRGMRISIEDKREEEPVINEYHYDGGIKSYVEYLN
ANKTVIFPEPVYLEGEQQDIAVEVSMQYTDGYHSNIMSFANNIHTYEGGTHESGFKTALT
RVINDYARKQKLMKENDDNLTGEDVREGLTAVISIKHPDPQFEGQTKTKLGNSEVRTVTD
RLFSEHFMKFLLENPSVGRQIVEKGLLASRARLAAKRAREVTRRKGALEISNLPGKLADC
SSNDPEKCELFIVEGDSAGGSAKQGRNREFQAILPIRGKILNVEKASMDKILANEEIRSL
FTAMGTGFGEDFDVSKARYHKLVIMTDADVDGAHIRTLLLTLFYRYMRPIVEAGYVYIAQ
PPLYGVKQGKNITYVQPGKNAEEELKQVVASLPASPKPSVQRYKGLGEMDDHQLWETTMD
PSNRMMARVSVDDAIAADQIFEMLMGDRVEPRRAFIEENAHYVKNLDI
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaaagaagtttagtagaacgcgctaaagagtatgatgccagtcagattcaa
gtacttgaaggacttgaagccgttcgtaaacgacctggcatgtatatcggttcgactagt
tctgagggtctgcatcaccttgtttgggaaattgtcgataattcgatcgatgaagtatta
gcaggttttgcaacgaaaatccatgtgattattgaaaaagacaacagtatcaccgttatt
gacgacggtcgggggatacctgtagatatccaggcaaaaactggacgtcctgcagttgaa
acggtctttactgttttacatgctggaggaaaattcggcggtggtgggtacaaagtttct
ggtggacttcacggagtaggatcttctgttgtaaacgcgctttctacacagcttgatgtc
aaagtatacaaagaaggaaatgtgtactatcaagaatatcgtcgtggagctgtagtggac
gacttaaagattatcgaacaaacggatcgccatggaacaacggttcactttacgccagac
cctgaaatttttacagagacaactgagtttgatttttcaaaattggctacccggatccgt
gaacttgctttcttgaaccgcgggatgcgtatatcgattgaagacaaacgagaagaagaa
ccagtcatcaatgaataccattatgacggcgggatcaaaagttatgtcgaatacttgaat
gcaaacaaaaccgtgatttttccagaacctgtatatttggaaggtgaacagcaagatatc
gcagttgaagtctctatgcaatatacagacggctaccattccaatatcatgagttttgcc
aacaatatccatacgtatgaaggtggaacacatgaatcaggattcaagactgctttaact
cgtgtgataaatgattatgcccgaaaacaaaagctgatgaaagaaaatgacgacaacttg
accggtgaagacgtgcgagaaggattgacagctgttatttctatcaagcatcctgaccct
caattcgaaggacaaacaaaaacaaaattgggcaattccgaagtacggacagtcactgat
cggttatttagcgaacatttcatgaaattcttgctggaaaacccaagtgtgggccggcaa
attgttgaaaaaggattactagcttccagagctcgtctagcagcgaaacgtgcgcgtgaa
gtaacgagacgtaaaggtgctttagagattagtaatctgccaggaaaattagcggactgc
tctagcaacgatcctgaaaaatgcgaattgttcatcgtcgaaggagattcggccggcgga
tcagctaagcaaggtcgtaatcgagagtttcaagccatcttgcctattcgtgggaaaatc
ttgaatgttgaaaaagcaagcatggacaagatcttggcaaatgaagagatccggtcttta
tttactgctatgggtacagggtttggagaagattttgatgtatcgaaagctcgctaccac
aaattagttatcatgactgatgccgatgtcgacggcgcgcatatccgtacattgctgctg
actcttttttatcgttacatgcgtcctattgttgaagctggatacgtctatattgctcag
ccacctttatacggggtaaaacaagggaagaatattacgtatgtacaaccaggaaaaaat
gcagaagaagagttgaaacaagtcgttgcttcacttcctgcctcaccaaaaccaagcgtt
cagcgttataaaggacttggagaaatggatgatcatcaactatgggaaacaactatggac
ccaagcaatcggatgatggcccgcgtcagtgtggacgatgctattgcagcagatcagata
tttgaaatgttgatgggggatcgagtagaaccccgtcgtgcattcatcgaggaaaatgca
cactatgtgaagaacttagatatttaa
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