Eptesicus fuscus (big brown bat): 103293730
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Entry
103293730 CDS
T09083
Symbol
DDX6
Name
(RefSeq) probable ATP-dependent RNA helicase DDX6
KO
K12614
ATP-dependent RNA helicase DDX6/DHH1 [EC:
5.6.2.7
]
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
103293730 (DDX6)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
efus03019
]
103293730 (DDX6)
03036 Chromosome and associated proteins [BR:
efus03036
]
103293730 (DDX6)
Enzymes [BR:
efus01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
103293730 (DDX6)
Messenger RNA biogenesis [BR:
efus03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
103293730 (DDX6)
mRNA degradation factors
5'-3' decay
Decapping complex
103293730 (DDX6)
Chromosome and associated proteins [BR:
efus03036
]
Eukaryotic type
Gene silencing
piRNA pathway
103293730 (DDX6)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-GeneID:
103293730
NCBI-ProteinID:
XP_008148317
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All DBs
Position
13:1493794..1529806
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AA seq
548 aa
AA seq
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MRASYCCLLFRDLQVLACIAIKDSILSKTSIYLFILESLINCITVSLLIFKSVEVWKRHL
YVSYSMSTARTENPVIMGLSSQNGQLRGPVKPSGGPGGGGTPTQQQMNQLKNTTTINNGT
PQQAQSVTAAIKPGDDWKKTLKLPPKDLRIKTSDVTSTKGNEFEDYCLKRELLMGIFEMG
WEKPSPIQEESIPIALSGRDILARAKNGTGKSGAYLIPLLERLDLKKDNIQAMVIVPTRE
LALQVSQICIQVSKHMGGAKVMATTGGTNLRDDIMRLDDTVHVVIATPGRILDLIKKGVA
KVDHVQMIVLDEADKLLSQDFVQIMEDIILTLPKNRQILLYSATFPLSVQKFMNSHLQKP
YEINLMEELTLKGVTQYYAYVTERQKVHCLNTLFSRLQINQSIIFCNSSQRVELLAKKIS
QLGYSCFYIHAKMRQEHRNRVFHDFRNGLCRNLVCTDLFTRGIDIQAVNVVINFDFPKLA
ETYLHRIGRSGRFGHLGLAINLITYDDRFNLKSIEEQLGTEIKPIPSNIDKSLYVAEYHS
EPVEDDKP
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atgagagcaagttactgctgcttactgttcagagacttacaggtgcttgcctgcattgca
ataaaggactcaatattgagcaagacttctatttatctcttcattttggagagcctaata
aactgtattacagtttctctactgattttcaaaagtgttgaagtttggaagagacatctg
tacgtttcatacagcatgagcacggccagaacggagaaccctgttataatgggtctgtcc
agtcagaacggtcagctgaggggccctgtgaagcccagcggtggccccggaggagggggc
acaccgacacagcaacagatgaaccaactgaaaaacaccaccaccatcaataatggcact
ccgcagcaagcgcagagtgtgaccgccgctatcaaacctggtgatgactggaaaaagact
ttaaaactccctccaaaggatctaagaatcaaaacttcggatgtaacctccacaaaagga
aatgagtttgaagattactgtttaaagcgggagttactgatgggaatttttgaaatgggc
tgggaaaagccatctccgattcaggaggagagcattcccatcgctttatctggtagggat
attttagctagagcaaaaaatggaacgggcaagagtggtgcctacctcattcccttactt
gaacggctagacctgaagaaggacaatatacaagcaatggtgattgttcctacaagagaa
cttgctctacaggtcagtcaaatttgcatccaggtcagcaaacacatgggaggggccaaa
gtgatggcaaccacaggaggaaccaatttacgtgatgacataatgaggcttgatgataca
gtgcacgtggtaatagctacccctgggagaatcctggatctcatcaagaaaggagtagca
aaagttgatcatgtccagatgatagtattggatgaggcagataagttgctgtcacaggat
tttgtgcaaataatggaggatattattctcacgctacctaaaaacagacagattttatta
tattccgccacttttcctcttagtgtacagaagttcatgaattcccatttgcagaaaccc
tatgagattaacctgatggaggaattaactttgaagggagtaacccagtactacgcatat
gtaactgagcgccaaaaagttcactgcctcaacacacttttctccaggcttcagataaac
cagtctatcattttctgtaactcctctcagcgagttgaattgctagccaagaagatttct
caactgggttattcttgcttctatatccatgctaaaatgaggcaggaacatcgaaatcgt
gtctttcatgattttcgaaatggcttatgccgcaatctcgtttgcactgatttgtttacc
cgaggtattgatatacaagctgtgaatgtggtaataaactttgacttcccaaagctggca
gagacctatctccatcgtattggaagatcaggtcgctttggtcatcttggcttagctatc
aacttgatcacatatgatgatcgcttcaacctgaaaagtattgaggagcagctgggaaca
gaaattaaacctatcccaagcaacattgacaagagcctctatgtggcggaataccacagc
gagcctgtagaagatgataaaccataa
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