Eptesicus fuscus (big brown bat): 114232885
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Entry
114232885 CDS
T09083
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain
KO
K16617
collagen type XIII alpha
Organism
efus
Eptesicus fuscus (big brown bat)
Pathway
efus04974
Protein digestion and absorption
Brite
KEGG Orthology (KO) [BR:
efus00001
]
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
114232885 (COL13A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
efus00536
]
114232885 (COL13A1)
Glycosaminoglycan binding proteins [BR:
efus00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
114232885 (COL13A1)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
114232885
NCBI-ProteinID:
XP_054585319
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Position
17:complement(19425804..19564087)
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AA seq
776 aa
AA seq
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MVAERARKAAAAGARGPGERGAPATVALAVAPAERCARLPSPGSCGLLALALCSLGLSLL
AHFRTAELQARVLRLEAECGEQQMETAILGRVNQLLDERWKLHSRRRREAPKTSPGCHCP
PGPPGPVGRPGLPGDKGAIGMPGRVGVKGQPGEKGAPGDAGMSIIGPRGPPGQPGTRGFP
GFPGPIGLDGKPGYPGPKGEMGLAGPRGQPGPQGEKGEKGQCGEYPHREYLSGSLAALHS
NQIITLKLLPLLNSVRLAPPPVIKRRTFQGEQGQAGIQGPPGPPGPPGPSGPLGHPGLPG
PMGPPGFPGPPGPKGDPGIQGYHGRKGERGMPGMPGKHGVKGAPGIAVAGMKGEPGTPGA
KGEKGAAGLGLPGQKGEKGDSGNSIGGGRGDPGPPGLPGPPGPKGEAGVHGQAGPPGKQG
DKGDPGVPGAQGPAGPKGSKGEAGEGEAVECNASTNEALQGPPGLPGQIGPPGAPGIPGQ
KGEIGLPGPPGHDGEKGPRGKPGDMGPPGPQGPPGKPGPAGIRGEDGHPGSPGEKGEKGE
TGQAGPPGLDGPTGEKGEPGGPGRPGTTGLPGPIGLPGFTGEKGEPGEKGDPGVEVPGPP
GPEGPPGPPGLQGIPGPKGEAGLDGAKGEKGVQGEKGDRGPLGLPGASGLDGRPGPPGTP
GPIGVPGPAGPKGERGSKGDPGMTGPTGAAGLPGLHGPPGDKGNRGERGKKGSRGPKGDK
GDQGAPGLDAPCPLGEDGLPVQGCWNKLPIQNAHPTQDKMDLLSHEGDKHPEAPWH
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atggtagcggagcgcgcccgcaaagcggcagccgcgggtgcccgcgggcccggggagcgg
ggcgctccggcgacggtggcgctggcggtggcgccggcggagcgctgcgcgcggctgccg
agcccgggctcgtgcgggctgctggcgctggccctctgctcgctggggctcagcctgctc
gcccactttcggacggcggagctgcaggcccgggtgctgcgcctggaagccgagtgtggg
gagcagcaaatggagacggctattttgggacgagtcaaccaactgcttgatgagagatgg
aagctccactcccggaggcgccgagaagcccccaagacgtctccagggtgtcactgccct
ccaggacctcctggtcccgttgggagacctggcctcccgggggacaaaggtgccattggg
atgcctggacgtgtgggagtaaagggccaaccaggcgagaagggggccccaggagatgcc
gggatgtccatcatcgggccccgaggcccccctggccagccgggcacccgaggttttcct
ggatttccgggtcccattgggctagacggcaaaccgggctacccgggacccaaaggagag
atgggcctggcgggtccccgaggacagccggggccccaaggagaaaagggagaaaagggt
cagtgtggagaatacccgcaccgggagtacctaagcggctctctagcagctctgcactcc
aaccagataattaccctgaagctgctgcctctcctcaattcagtgcgactggctccaccc
ccagtcattaaaaggcggaccttccagggtgaacagggccaggccggtatccaaggccca
ccagggccaccaggcccccctggaccaagtggacctctggggcatccaggactgccaggg
cccatggggccacctggctttcctgggcctcctggaccgaagggagacccagggatccag
ggctaccatggccggaagggagaacggggcatgccagggatgccgggcaaacacggagtg
aagggggctcctggcatcgccgtggctgggatgaagggagaaccaggaaccccaggagcc
aagggtgagaagggcgccgcgggccttggcctcccagggcagaagggagagaaaggcgat
tctggcaactccattggaggaggcagaggggaccccggccccccagggctccccgggccc
ccagggccaaagggagaagctggtgtccatggccaggccggcccccccggaaagcagggg
gacaagggggaccctggagtgcctggagcacagggaccagctggccccaagggctccaag
ggagaggccggggaaggagaggcggtggagtgcaacgccagcaccaacgaggcgctccag
gggccccctggtcttcccgggcagatcggcccacctggagctccagggatcccaggccag
aagggggagattggactgccaggccctccaggccacgatggagaaaagggacctcgaggc
aaaccaggagacatgggccctcctggtccccaaggccccccaggaaagcctgggcctgca
ggaataaggggagaagacggacatccagggagcccgggagagaaaggggagaaaggggag
acggggcaggcaggcccaccgggtctagatggcccaactggggagaaaggagaaccaggt
ggcccagggagacccggaacgacaggattgcctggcccgatcgggctcccgggatttaca
ggggagaaaggagaacctggggaaaagggtgacccaggagtagaggttcctgggccaccg
ggaccagaggggcctcccggacctccggggctccaaggcattcctggaccaaagggggaa
gcaggactagatggagcaaaaggagagaagggtgtccagggagaaaaaggagaccgaggt
cctctgggattgcccggagcttcaggtttggacggcagacctgggccaccgggcactccg
ggaccaattggagttccaggcccagccggaccaaagggtgagaggggcagcaaaggcgac
cctgggatgacaggaccaacgggagcagctgggcttccgggtttacacggaccacccggg
gacaaaggaaaccggggggagagggggaagaaaggctctagagggcctaaaggggataag
ggagaccaaggagcgcctggattagacgccccctgtccgttgggcgaagatggcttacca
gtccagggctgctggaacaagttgcccatccagaacgcccatccaacccaggacaagatg
gacctcctttcacacgagggggataaacacccagaggccccctggcactaa
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