Sinorhizobium garamanticum: PZN02_001822
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Entry
PZN02_001822 CDS
T09001
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
egi
Sinorhizobium garamanticum
Pathway
egi03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
egi00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
PZN02_001822
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
egi03400
]
PZN02_001822
DNA repair and recombination proteins [BR:
egi03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
PZN02_001822
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Ortholog
Paralog
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GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
WEX89262
LinkDB
All DBs
Position
1:complement(1976890..1977744)
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AA seq
284 aa
AA seq
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MPARALWKGQLRLSLVSIPVELFSATRPGASVSFRQIHKPSGKPIHYQKVVEGVGPVDVD
DIVKGYEYEDDKYVLLEPKEVDSIKLETKKTLELVQFVGVADISPLYFDRPYYLVPADEL
AEDAYRVVRDALRQSERIGLGQLTLRGREYLAAVKPCGDGLLLETLRYADELRKADPMFS
DISGKKAEKELLEVASALIEKKTAPFDANAFKDNYTAALKELVKRKMKGKSTRVTVEEGE
RPERRGDNVVDLMAALKKSLESGEGKKSQPKAQSASRRGRRKSA
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgccggctcgcgcgctttggaaaggtcaacttcgtctctcgctggtttcgatcccggtc
gaattgttcagtgcgacccgcccgggcgccagcgtctccttccgccagatccacaagcct
tcgggcaagccgatccactaccagaaggtggtggaaggcgtcgggccggtcgacgtcgac
gacatcgtcaaaggctacgaatacgaggacgacaaatacgttctcctcgaaccgaaggaa
gtggattccataaagctcgagacaaagaagaccctggaactggtgcaattcgtcggcgtg
gccgatatctcgcccctctatttcgacaggccgtactatctcgtcccggcagatgagctc
gcggaggacgcctaccgggtcgtgcgcgatgcgctccggcaatcagaaaggatagggctc
ggccaactgacactgagaggccgcgaatacctggcggcggtcaaaccctgcggcgacggc
ctgctcctggagacgctgcgctatgcggacgaactcaggaaggccgacccgatgttctcc
gacatctcgggcaagaaagcggaaaaggagctgctcgaggtcgccagcgcccttatcgaa
aagaaaaccgcgcccttcgacgccaacgccttcaaagacaactatacggcggccctgaag
gaactcgtcaagcgcaagatgaaaggcaagtcgacgcgcgtcaccgtcgaggagggcgag
cgcccagagcggcgcggggacaatgtcgtcgacctgatggcggcgctgaagaaaagcctc
gaaagcggcgagggcaagaaatcgcagccaaaggcgcaatccgcctcgcgccgtggccgg
cggaaatcggcatga
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