Eucalyptus grandis (rose gum): 104423165
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Entry
104423165 CDS
T03547
Name
(RefSeq) putative tRNA pseudouridine synthase
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
egr
Eucalyptus grandis (rose gum)
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
egr03016
]
104423165
Enzymes [BR:
egr01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
104423165
Transfer RNA biogenesis [BR:
egr03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
104423165
Prokaryotic type
104423165
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
104423165
NCBI-ProteinID:
XP_010033936
UniProt:
A0A059AID4
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Position
10:37225710..37230545
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AA seq
529 aa
AA seq
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MAVCSHRLLHFPWLLLKPSSPRTSALANPDGSRRVGRLFHRCSAQTLSSSPPSPPALESC
GAPERSEQLKWQAFLKKKVVMRVGYVGTNYRGLQMQRDEHSLSTVEEELENAIYKAGGIL
ESNFGNLNRIAWARSSRTDKGVHSLATTISLKMEIPDDAWKGDPYGIHLASHINAYLPED
IRVFSILPSKRRFDPRRECNIRKYSYLLPAEIIGMKSNCTSSEVDHHISDFNDILNTFEG
EHPFHNYTVRSKYRRKLPIKKSRKDRRSTMEEKPFDAASASEEEESDEALTENELANNCE
GTDEHALQGGLDENLIDFCQNRRNDLRSRSSNNVIKARWLHEPDQKDRISSSHFRKILHC
SCGKLENLLGSSYVELSIWGESFMLHQIRKMVGTAVAVKRDLLPRDILTLSLAKFSRVVL
PLAPSEVLILRGNNYVTRKGPIDVSRPELMAFVESEAVLSTVDKFYRSVMLPQVARFLDP
SRPPWKEWVEKLDEHTPIPVTQLDELRAAWDSWKEAAETRKAAASVVSQ
NT seq
1590 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgtgctcgcatcgactgctgcacttcccatggctgttgctgaagccctcgagc
ccaagaacctcggctcttgcaaacccagatgggagcagacgcgtaggaaggctcttccac
cgctgctcagctcagaccctgtcttcctcgccgccttcgccgccggctctcgaatcctgc
ggcgccccggaaaggtcggagcagctgaaatggcaggcctttctgaagaagaaggtggtg
atgcgggtcgggtatgtgggcaccaattacaggggtcttcagatgcaacgagatgagcat
tcgttgtctactgtagaagaagagttggaaaatgctatctacaaggctggtggaattctg
gaaagtaactttgggaatctgaatagaattgcctgggccagaagtagccggaccgacaaa
ggagttcattcactggcgactaccatatcactcaagatggaaattcctgacgatgcatgg
aagggggacccttatggtatccatcttgccagtcatattaatgcatatcttcctgaagat
atcagagtttttagcattctaccttcaaaaaggagatttgatccaagacgggagtgcaat
attcggaagtattcgtaccttcttcctgctgaaattatcgggatgaaaagtaattgtacc
tccagcgaagttgatcatcacatatcagattttaatgatatattgaacacttttgaggga
gagcatccttttcataactatactgtacgttccaagtacagaagaaagttgcccataaag
aagtcacggaaagacaggcgttcaactatggaagaaaaaccatttgatgcagcgtctgca
tctgaagaggaagaaagcgatgaagcgcttacagagaatgaacttgcgaataattgtgag
ggaacagatgaacatgctctccagggaggccttgatgaaaatttaattgacttttgccaa
aatcgtaggaatgatctacggagcagaagttcaaataatgtcattaaggcgagatggtta
catgaacctgatcagaaagaccgaattagttcttcccattttagaaagattcttcactgc
tcctgcggcaaattggagaatctgcttgggtcaagttatgttgagctctccatttgggga
gagtctttcatgttgcatcagatccgcaaaatggtggggactgctgtagctgtaaagcgt
gacttacttcctagagatattctcacattgtcattggccaaattttcccgtgttgtgcta
ccacttgctccatctgaggtattgatacttagagggaacaattatgtcacgagaaaggga
cctattgatgtttctaggccagaattgatggcatttgtggaatcagaagctgtgttgagc
accgttgacaaattttacagatcagtaatgttgcctcaagtagctagatttctggaccca
tcaagacccccttggaaggaatgggttgagaaattggatgagcacacgccaattccagtc
acacagttggacgaactcagggccgcttgggattcctggaaggaagctgcagagactcga
aaagctgctgcgtctgttgttagtcaatga
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