Eucalyptus grandis (rose gum): 104437239
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Entry
104437239 CDS
T03547
Name
(RefSeq) replication protein A 32 kDa subunit A
KO
K10739
replication factor A2
Organism
egr
Eucalyptus grandis (rose gum)
Pathway
egr03030
DNA replication
egr03420
Nucleotide excision repair
egr03430
Mismatch repair
egr03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
egr00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
104437239
03420 Nucleotide excision repair
104437239
03430 Mismatch repair
104437239
03440 Homologous recombination
104437239
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
egr03032
]
104437239
03400 DNA repair and recombination proteins [BR:
egr03400
]
104437239
DNA replication proteins [BR:
egr03032
]
Eukaryotic type
DNA Replication Elongation Factors
RPA (replication protein A)
104437239
DNA repair and recombination proteins [BR:
egr03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
RPA (replication factor A)
104437239
MMR (mismatch excision repair)
104437239
DSBR (double strand breaks repair)
HR (homologous recombination)
104437239
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RPA_C
tRNA_anti-codon
HTH_24
RMI2
GntR
HTH_11
DDRGK
HTH_36
TrmB
EAP30
HTH_5
HTH_27
TFA2_Winged_2
RuvB_C
Rrf2
MarR
HTH_6
MCM_WH_arc
Motif
Other DBs
NCBI-GeneID:
104437239
NCBI-ProteinID:
XP_010048453
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All DBs
Position
3:32791877..32795479
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AA seq
271 aa
AA seq
DB search
MFSGSQFDGFVPSQSTQSADSASPNPAKNWGTQGLVPVTVKQLSGALQSGDEKSNFSIDG
VDVTNVTLVGMVSEKTARVTDVSFALDDGTGRVECRRWVNESSDTKEMEEIHDGLYVRLV
GHLRSSQGKKQLAAFAVRPVTNFDEVTFHFIDCIHQHLQKCRVKGDAIAHSQSADFNTST
PISNKSNASLVAPTSEISGQFSVNGLKGCDQKVLEFLQQNYAQEKGIHRDEIAQQLKISV
NKIMESIRTLEEEGLIYSTIDEYHYKSTTDA
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgttctcgggcagccagttcgacggcttcgtgccttcccagtcgactcagtccgccgat
tccgcttctcccaaccccgccaagaactgggggacgcaggggctggtgccggtcacggtg
aagcagctgagcggagcccttcagtccggggacgagaaatcgaacttctccatcgacggc
gtcgacgtgaccaacgtcacgctggtcgggatggtgtccgagaagaccgcgagagtgacg
gatgtcagcttcgctttggatgacgggactggacgagtcgaatgcagaagatgggtgaat
gaaagttcagacaccaaggaaatggaagaaattcatgatggtctatatgtccgtcttgtt
gggcacttaagaagttctcaggggaaaaagcaactcgcggcctttgctgttaggcctgtg
accaacttcgatgaagttacattccactttattgattgcatacaccagcatttacagaag
tgcagagtaaagggtgatgccattgctcattcccaatcggcagattttaacacaagcact
ccaatcagtaataaatcaaatgcgtctctggtagctcccacaagtgaaatttctggacaa
ttctccgtcaatggactcaagggctgtgaccagaaggtccttgaatttctacaacaaaac
tatgcacaagaaaagggtatccacagagatgaaattgcgcaacaactgaaaatttctgtc
aataagatcatggaatcaatcaggactcttgaagaggaaggtctgatttactcaactatt
gatgaatatcactataaatcaactacggatgcttaa
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