KEGG   Elaeis guineensis (African oil palm): 105040454
Entry
105040454         CDS       T03921                                 
Name
(RefSeq) MMS19 nucleotide excision repair protein homolog
  KO
K15075  DNA repair/transcription protein MET18/MMS19
Organism
egu  Elaeis guineensis (African oil palm)
Brite
KEGG Orthology (KO) [BR:egu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:egu03400]
    105040454
DNA repair and recombination proteins [BR:egu03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   NER (nucleotide excision repair)
    Other NER factors
     105040454
SSDB
Motif
Pfam: MMS19_N MMS19_C HEAT_2
Other DBs
NCBI-GeneID: 105040454
NCBI-ProteinID: XP_019710613
UniProt: A0A6J0PRK4
LinkDB
Position
1:complement(12382765..12413551)
AA seq 1154 aa
MDKKPSSWISHIEAFVDSSRPPKQQAANVDAIAALVKNDLLTLEALVRDMELYLTTSDHS
IRARGILLLAEILNCLMSKPLDGASISSLVEFFTSKLADWQVLRGALIGCLALLRRKKNV
GMVKSSEARAVAESYLMNVQVQSLAVHDRKLCFEVLQCLLEVYPEAVEMLGDDLVYGICE
AIDEEKDPRCLMLTFHLVEILARVFPDSSGSVASFAGDLFDILSRYFPIYFTHPRSDDLD
ITREELSMALMHAFCSTPFFEPFAIPLLLEKLSSSLPLAKLDSLKYLNNCIQHYGTDRMI
KHAKAIWSNLKDVILNHSPHKTLFSTSELAGNMESEENQIAKEALICLQTAILHLDSLEK
NPILSFIVEDEDIEMKFGLVSNEGTGTGISIESRRHLSAVGNILSVSSKASMSGCTRVFQ
KFFPRLMNILEISASSSSNGCNTNNGTSSLNFGALYLCIQLLASFRELILTSQDFSPQVI
TVQDGWWCMLQHFSGPLAHALGSALMGARSSELVNNNTGHEHAIYEVKGLQVLATFPGCY
LPTSEDVYEYILVIFMSIATERFEDAFLWKLSVKALIEIGSFIEKYHDSYRGISFNRIVV
ERIVSLFQQDDSTMPLALKLDAISEIGTIGVDYMSRVIKLLEEAILSKFLAVCVEGRLEA
AEILVPLLECYSNRVLLWCYTSGNFDEVAMQFALCIWNQMESITIFDKDAKIQDLFDRMM
TTMKLLVGGCAEENQSLIVRKAYSVLLSTSFLSEESLPFSSSKLEGLQVTPDLVNLSWRD
EWIVSLFASVVIALLPQTPLPDVKLLLNVLTTFLLKGHLPAAQALASMVNKWHVNIDKSE
VPNAYTLDEAIEMILERSLLSVQSSSNLGKSDLLNKDERMLSCLCLLNNNSSFQSNAVVG
LAWIGKGLLMRGHEKVKEIAMLLLQYLLSNPYKELHSDASGSGDSLDVHTSLATSAADAF
HVILSDSEVCLNKNFHAMIRPLYKQRFFSSMMPVLLSSIKQSCSSSMRVALYRAFAHVIS
DAPLAAVVAEAKKILPSLMDSLAMLSEDVLNKDLIYSLLLVLSGILMDDNGKEAIIENIN
TVISDLIRLIFYPHMMLVRETAIQCLVAMSALPHARIYPMRPQVLRAVSKALDDRKRVVR
QEAVRCRQAWVSMA
NT seq 3465 nt   +upstreamnt  +downstreamnt
atggacaagaagccgagttcttggatttctcacattgaagccttcgtcgattcctcgcgc
cctcccaaacagcaggctgcaaatgttgatgctattgctgcattggtgaagaatgacctc
ttaactctcgaggcattggtaagagatatggaactgtatctaaccacctcggatcattct
attcgtgcgagaggtatccttctcttagcagaaattcttaactgtctcatgtcaaaacca
ttagatggtgccagtataagtagcttggtagagttctttacgtcaaagctggcagattgg
caagtcttacgtggagcacttatcggttgcttggctcttctgagaaggaagaaaaatgtt
ggtatggtcaaaagtagtgaagcaagggcagttgctgagtcttatttaatgaacgtacaa
gtacagtcgctagcagttcatgatcgtaagttatgctttgaagttcttcagtgcctattg
gaggtctacccagaagctgttgagatgctgggtgatgaccttgtttatggaatatgtgaa
gcaattgatgaagaaaaggatcctcgatgcttgatgctaacttttcatctagtggaaatc
ctggcacgagtatttcctgattcatctggttcagttgcaagttttgcaggggatcttttt
gatattttaagtagatattttcctatatattttacacatccaagaagtgatgatttagac
attacaagggaagagctttctatggcacttatgcatgccttctgttcaactccatttttt
gagccatttgcgatcccactgctgcttgagaaactttcctcttctcttccattagctaag
cttgattctttgaagtatcttaacaattgcatacagcactatggaactgatagaatgatc
aagcatgctaaagctatttggtctaatttaaaagatgtgatcttgaaccattcaccacac
aaaactctattttcgacttcagagttggctggaaatatggaatctgaggaaaatcagatt
gcaaaagaagctctaatttgtctgcaaacagctattttgcatttagactctttagagaaa
aatcctattctgagttttattgttgaagatgaagatattgagatgaagtttgggcttgtt
agcaatgaaggaactggtacaggcatatccattgaaagtcgacgccatctgagtgctgtt
ggaaatatcttatcagtctcatcaaaagcctccatgtctggctgcacaagggtatttcaa
aaattttttcctcgcttgatgaatattttggaaatttctgcaagcagctcatctaatggt
tgcaatacaaacaatggaactagtagcttgaattttggagcgctttatctctgcattcaa
ctccttgcttcatttagggaattgatattgacttctcaagacttctcacctcaagttatt
acagtgcaagatggctggtggtgcatgctccaacatttctctggtccattagctcatgct
cttggatcagctttgatgggagctaggagctctgaacttgtgaataacaacactggacat
gaacatgccatttatgaggtaaagggcttgcaggtacttgcaacatttccaggttgctac
ttgcctacatctgaggatgtttatgaatatatcttggtgattttcatgtcaatagccact
gaaaggtttgaagatgcattcttgtggaaattatcggtgaaggcattgatcgaaattggt
tcatttattgaaaaatatcatgattcttatagaggaataagctttaacagaattgttgtt
gaaaggattgtttctttgtttcaacaagatgattctaccatgcctcttgcactaaaactg
gatgcaatttctgaaattggtactattggggtagattacatgtcaagagtaattaaattg
cttgaagaagctattctttccaaatttttggctgtctgcgtcgaaggacgtcttgaagct
gctgagattttagtgcctctgcttgagtgctactccaatcgggtgcttctgtggtgctac
acttctggtaattttgatgaagttgcaatgcagtttgctctctgtatctggaaccaaatg
gaaagcatcactatttttgacaaagatgcaaaaattcaggatctttttgatagaatgatg
acgacaatgaagcttctagttgggggttgtgctgaggaaaatcaatccttgatcgtgcgg
aaagcctatagtgttcttttatctacgagctttctttcagaggagtcattgccattttct
tcatccaagttagaagggttacaagtaactccagatttagttaacctatcatggagagat
gaatggattgtatctctctttgcatcagtagtgatagcgcttcttccacaaacacctctg
ccagatgtaaaattgttattgaatgtgcttacgactttcctactcaaaggacatctgcca
gcagctcaagcattggcttctatggttaacaaatggcatgtaaatattgataaatcagaa
gtgccaaatgcttatacattggatgaagcaattgaaatgattcttgagaggagtttattg
agtgtccaaagcagtagtaatttgggaaagtctgatctcctgaacaaggatgagagaatg
cttagttgtttatgtctcttaaacaacaacagttcttttcagagtaatgcagtggttgga
ttggcatggattggaaaaggtctgcttatgagaggacatgaaaaagtaaaggaaatagca
atgcttttgttacaatatttgctttcaaatccatataaggaattacactctgatgcatct
ggaagtggtgatagcctggatgtgcatacttctctagcaacatctgcagcagatgcattc
catgtaattctgagtgattcagaagtttgcttgaataaaaatttccatgcaatgataaga
ccactttataaacaacgtttcttctcaagcatgatgcctgtcctgctctcatcaatcaaa
caatcttgctcgtcaagtatgagagtggcattatatcgagcttttgcgcatgttatatcg
gatgctccactagctgcagtagttgctgaagccaagaagatcctaccttcattgatggat
agcttagccatgttaagtgaggatgttctgaataaagatctaatatacagcctgctgctg
gtcctatctgggatcctgatggatgataatggaaaagaagccatcatagagaacatcaat
actgttataagtgacctcatcagactgattttctatccccatatgatgcttgttcgggag
acagcaattcaatgtcttgtagccatgtcagcccttcctcatgcaaggatctatcctatg
aggcctcaggtcctgcgtgctgtatcaaaagctcttgatgatcggaaaagggttgtccgt
caagaggctgtgagatgtcgtcaagcatgggtatcgatggcatga

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