Edwardsiella hoshinae: A9798_03560
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Entry
A9798_03560 CDS
T04508
Name
(GenBank) RNA polymerase sigma factor RpoE
KO
K03088
RNA polymerase sigma-70 factor, ECF subfamily
Organism
eho
Edwardsiella hoshinae
Brite
KEGG Orthology (KO) [BR:
eho00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
eho03021
]
A9798_03560
Transcription machinery [BR:
eho03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
A9798_03560
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
HTH_23
HTH_16
HTH_20
HTH_28
Motif
Other DBs
NCBI-ProteinID:
AOV96117
UniProt:
A0A376D944
LinkDB
All DBs
Position
821119..821694
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AA seq
191 aa
AA seq
DB search
MSEQLTDQVLVERVQKGDKKAFNLLVARYQNKVASLVSRYVPSGDVPDVAQESFIKAYRA
LDSFRGDSAFYTWLYRIAVNTAKNYLVAQGRRPPSSDVDAGEAENFDGASALKEISNPEN
LMLSDELRQIVFRTIESLPEDLRMAITLRELDGLSYEEIAAIMDCPVGTVRSRIFRAREA
IDSKVQPLIQR
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcagttaacggatcaggtattggtcgaacgcgtccagaagggggacaagaag
gcgtttaacctgctggtagcgcgctaccagaataaggtggcgagtctggtatcccgttac
gttccatcgggcgatgtgccggatgtggcgcaggagtcgttcatcaaagcctatcgcgcg
ctggattccttccgcggtgatagcgcgttttatacctggctctatcgtatcgccgtcaat
acggcgaagaattatttggttgctcaggggcgtcgcccgccgtccagcgatgtggatgcc
ggtgaggcggaaaattttgacggtgccagtgcgctgaaagaaatttcgaaccctgagaac
ttaatgttgtcagatgagctaaggcagatcgtttttcgcaccattgagtcattgccagag
gacttacgcatggcaatcacgctcagggagctggatggactgagctatgaagagatagcc
gccatcatggattgtccggtgggtacagtgcgttcacgcattttccgggcgagggaagcg
atcgacagtaaagttcagccgctgattcagcgttag
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