Emiliania huxleyi: EMIHUDRAFT_233454
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Entry
EMIHUDRAFT_233454 CDS
T02915
Name
(RefSeq) hypothetical protein
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
ehx
Emiliania huxleyi
Brite
KEGG Orthology (KO) [BR:
ehx00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ehx03016
]
EMIHUDRAFT_233454
Enzymes [BR:
ehx01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
EMIHUDRAFT_233454
Transfer RNA biogenesis [BR:
ehx03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
EMIHUDRAFT_233454
Prokaryotic type
EMIHUDRAFT_233454
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-GeneID:
17275149
NCBI-ProteinID:
XP_005782304
JGI:
Emihu1_233454
UniProt:
R1DCB9
LinkDB
All DBs
Position
Unknown
AA seq
154 aa
AA seq
DB search
MLLTAVGAAIAAAATARYRARVSYDGGAYAGMQYQPTRPTVQGTLQRALARRCQMPAVRV
VAAGRTDAGAVHFDLDSGTYDPADLERSLGALLPPDLAVSHVERAGEVDGAGRSWHAIFW
ATGKRYSYRLYAGPPGGRRSTPCLSAITPVAVTS
NT seq
465 nt
NT seq
+upstream
nt +downstream
nt
atgctgctaacggcggtgggggcggcgatagcagccgcggcgacggcacgctaccgcgcg
cgggtctcgtacgacggcggcgcctacgctggaatgcagtaccagccgacgaggcccaca
gtgcagggtacgttgcagagagcgctcgcgcgccgctgtcagatgccagccgtgcgcgtg
gttgctgctggccgcaccgacgccggcgcggtgcactttgatctcgacagcggcacgtac
gatccggcggacctcgagcgctcgctcggcgcgctgctgcctccggacctggcggtgagt
cacgtcgagcgcgcgggcgaggtggatggcgcggggaggtcgtggcacgcaatcttctgg
gcgaccggcaagcgctactcgtaccggctgtacgccggccctccgggcggcaggcggtcg
acgccgtgcctgtccgccatcactccagtcgccgtcaccagctaa
DBGET
integrated database retrieval system
