Escherichia coli O18 K1 H7 IHE3034 (ExPEC): ECOK1_3552
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Entry
ECOK1_3552 CDS
T01997
Symbol
garD
Name
(GenBank) galactarate dehydratase
KO
K01708
galactarate dehydratase [EC:
4.2.1.42
]
Organism
eih
Escherichia coli O18:K1:H7 IHE3034 (ExPEC)
Pathway
eih00053
Ascorbate and aldarate metabolism
eih01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
eih00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00053 Ascorbate and aldarate metabolism
ECOK1_3552 (garD)
Enzymes [BR:
eih01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.42 galactarate dehydratase
ECOK1_3552 (garD)
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Gene cluster
GFIT
Motif
Pfam:
GD_AH_C
GD_AH_second
SAF
Motif
Other DBs
NCBI-ProteinID:
ADE89111
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Position
3652201..3653772
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AA seq
523 aa
AA seq
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MANIEIRQETPTAFYIKVHDTDNVAIIVNDNGLKAGTRFPDGLELIEHIPQGHKVALLDI
PANGEIIRYGEVIGYAVRAIPRGSWIDESMVVLPEAPPLHTLPLATKVPEPLPPLEGYTF
EGYRNADGSVGTKNLLGITTSVHCVAGVVDYVVKIIERDLLPKYPNVDGVVGLNHLYGCG
VAINAPAAVVPIRTIHNISLNPNFGGEVMVIGLGCEKLQPERLLTGTDDVQAIPVESASI
VSLQDEKHVGFQSMVEDILQVAECHLQKLNQRQRETCPASELVVGMQCGGSDAFSGVTAN
PAVGYASDLLVRCGATVMFSEVTEVRDAIHLLTPRAVNEEVGKRLLEEMEWYDNYLNMGK
TDRSANPSPGNKKGGLANVVEKALGSIAKSGKSAIVEVLSPGQRPTKRGLIYAATPASDF
VCGTQQVASGITVQVFTTGRGTPYGLMAVPVIKMATRTELANRWFDLMDINAGTIATGEE
TIEEVGWKLFHFILDVASGKKKTFSDQWGLHNQLAVFNPAPVT
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atggccaacatcgaaatcagacaagaaacgccaactgcgttttatataaaagttcacgac
acagataatgtggcaattattgttaatgataatggcctgaaagcaggaacgcgttttccg
gatgggctggaattaattgaacatattccccaggggcataaagtcgcattgctggacatt
ccggctaatggtgaaattattcgttatggcgaggtgattggttacgccgtgcgcgcaatc
ccacgcggaagctggatcgacgaatcaatggttgtactaccggaagcgccgccgttacat
acgctgccactggcaaccaaagtcccggaacccttaccgccgctggaaggatacaccttt
gagggctatcgcaatgccgatggcagcgtgggcaccaaaaacctgctcggcatcaccacc
agcgtccactgtgtggcaggcgtggtggactacgtagtaaaaatcattgaacgcgatctg
ctaccgaaatacccgaacgtcgatggcgtggtggggctgaatcatttgtacggttgtggc
gtggcgattaacgcacccgcggcagttgtacctattcgtaccattcacaatatttcgctg
aaccctaactttggcggcgaagtaatggtgattggtctgggttgtgaaaagttgcagcct
gaacgcctactgactggaacggatgatgtgcaagctattccagtagaaagcgccagcatt
gtcagtttgcaggatgaaaagcatgtcggttttcagtccatggtcgaggatattttgcag
gtcgccgaatgccatctacaaaaactgaatcaacgtcagcgagaaacctgtccggcttca
gaactggttgtcggcatgcagtgcggtggcagcgatgcgttttctggcgtaacggcaaac
ccggcggttgggtatgcgtctgatctattggtgcgctgcggcgcaacggtgatgttttca
gaagtcacagaagtgcgtgacgcgatacatctgctgacaccacgcgcagtgaacgaagag
gtcggcaaacggctgctggaggagatggagtggtacgataactatctcaatatgggaaaa
accgatcgcagcgccaacccttcgccggggaacaagaaaggcggtctggcaaatgtggtg
gagaaggcactcggctccattgctaaatcgggtaaaagtgcaattgttgaagtgctgtcg
cccggccaacgcccgactaaacgcggattaatttacgccgcgacgccagccagcgatttt
gtctgtggcacgcaacaggtggcttcgggtatcaccgtgcaagtgtttacgaccggtcgt
ggtacgccgtacggcctgatggcggtacccgtcattaaaatggcgacccgcaccgagctg
gcgaaccgctggtttgatttaatggatattaacgcgggcactatcgctaccggcgaagaa
accattgaagaagtgggctggaagttgttccactttattctcgacgtcgccagcgggaag
aagaaaactttctcggatcaatggggactgcataaccagctggcggtgtttaacccggca
ccggtgacctga
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