Escherichia coli KO11FL: KO11_01895
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Entry
KO11_01895 CDS
T02104
Symbol
rpiR
Name
(GenBank) DNA-binding transcriptional repressor RpiR
KO
K23238
RpiR family transcriptional regulator, repressor of rpiB and als operon
Organism
ekf
Escherichia coli KO11FL
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ekf03000
]
KO11_01895 (rpiR)
Transcription factors [BR:
ekf03000
]
Prokaryotic type
Helix-turn-helix
Other families
KO11_01895 (rpiR)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SIS
HTH_6
SIS_2
BMC
IF3_N
DUF2529
Motif
Other DBs
NCBI-ProteinID:
AFH15370
LinkDB
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Position
398768..399658
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AA seq
296 aa
AA seq
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MSQSEFDSALPNGIGLAPYLRMKQEGMTENESRIVEWLLKPGNLSCAPAIKDVAEALAVS
EAMIVKVSKLLGFSGFRNLRSALEDYFSQSEQVLPSELAFDEAPQDVVNKVFNITLRTIM
EGQSIVNVDEIHRAARFFYQARQRDLYGAGGSNAICADVQHKFLRIGVRCQAYPDAHIMM
MSASLLQEGDVVLVVTHSGRTSDVKAAVELAKKNGAKIICITHSYHSPIAKLADYIICSP
APETPLLGRNASARILQLTLLDAFFVSVAQLNIEQANINMQKTGAIVDFFSPGALK
NT seq
891 nt
NT seq
+upstream
nt +downstream
nt
atgagccagtcagagtttgattcagcgcttccgaacggtatagggttagcgccttacctg
cgaatgaagcaggaaggaatgacagaaaatgaaagccgcatcgtggagtggttactcaaa
cccggtaacctgagttgtgcacccgcaattaaagatgtcgcagaagctctggcggtatct
gaagcgatgatagttaaggtatcaaagctgctggggtttagcggctttcgtaacttacgc
agtgcgctggaagattatttttctcagtcagaacaggtattgccttccgagttggctttt
gatgaagcgccgcaggatgtggtgaataaggtatttaacatcactttacgcaccattatg
gaaggtcagtcgatcgtcaacgttgatgagatccaccgtgccgcccgctttttctatcag
gccagacagcgggatttgtacggtgccggaggatcaaatgctatctgtgctgatgtacag
cacaagttcttgcgcattggcgtacgctgtcaggcctatcctgatgctcacatcatgatg
atgtccgcttcgttgttacaggaaggagatgttgtgctggtagtgacccattccgggcga
accagtgatgtaaaagcggccgtagaactggcaaaaaagaacggggcaaagattatttgt
ataacccatagctaccattcaccgatagcgaaactggccgattatattatttgctcacca
gccccggaaacgccgttattaggtcgtaatgcctcggcaagaatattacaactaactttg
ctggacgctttttttgtctctgtcgcccagctcaacattgaacaagctaatattaatatg
caaaaaaccggcgcaattgttgatttcttctcaccaggcgcgctgaaataa
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