Escherichia coli KO11FL: KO11_20180
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Entry
KO11_20180 CDS
T02104
Symbol
nei
Name
(GenBank) endonuclease VIII
KO
K05522
endonuclease VIII [EC:3.2.2.-
4.2.99.18
]
Organism
ekf
Escherichia coli KO11FL
Pathway
ekf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
ekf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
KO11_20180 (nei)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
ekf03400
]
KO11_20180 (nei)
Enzymes [BR:
ekf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
KO11_20180 (nei)
DNA repair and recombination proteins [BR:
ekf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
KO11_20180 (nei)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
DUF4351
Motif
Other DBs
NCBI-ProteinID:
AFH19002
LinkDB
All DBs
Position
complement(4270444..4271235)
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AA seq
263 aa
AA seq
DB search
MPEGPEIRRAADNLEAAIKGKPLTDVWFAFPQLKTYQSQLIGQHVTHVETRGKALLTHFS
NDLTLYSHNQLYGVWRVVDTDEEPQTTRVLRVKLQTADKTILLYSASDIEMLTPEQLTTH
PFLQRVGPDVLNPNLTPEVVKERLLSPRFRNRQFAGLLLDQAFLAGLGNYLRVEILWQVG
LTGNHKAKDLNAAQLDALAHALLDIPRFSYATRGQVDENKHHGALFRFKVFHRDGELCER
CGGIIEKTTLSSRPFYWCPGCQH
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaaggcccggagatccgccgtgcagcggataacctggaggcggcgatcaaaggc
aaaccactaactgatgtctggtttgccttcccgcagttaaaaacttatcaatcacaactt
atcggtcaacacgttacccatgtggaaacgcgtggtaaggcgttgttaactcatttttcc
aacgacttaacgctctacagccataatcagctttacggcgtctggcgcgtggttgatacc
gacgaagagccgcagaccacgcgagtactgcgggtaaaactgcaaacggctgacaaaact
attctgctttatagcgcctcggatattgagatgttgaccccggaacaactgaccacgcat
ccgtttttacaacgcgttggtcccgatgtgctgaatccgaatctgacgccggaggtggtg
aaagaacggttattgtcgccgcgctttcgtaaccgtcagtttgctggattactgctcgat
caggcgtttctggctgggcttggcaattatttgcgtgtggagatcctctggcaggttggg
ttgactggaaatcataaagcgaaagacctcaatgcggcacaactggatgcactcgcacac
gcgttactggatattcctcggttttcttacgctacgcgggggcaggtggatgagaataag
catcatggggcgctgtttcgctttaaggtttttcatcgtgatggcgaactgtgcgaacgc
tgtggcggcatcattgagaaaaccacgctgtcatctcgcccgttttactggtgtccgggc
tgccagcactag
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integrated database retrieval system
