Elizabethkingia miricola: VO54_03243
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Entry
VO54_03243 CDS
T03757
Symbol
rluD
Name
(GenBank) Ribosomal large subunit pseudouridine synthase D
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
elb
Elizabethkingia miricola
Brite
KEGG Orthology (KO) [BR:
elb00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
elb03009
]
VO54_03243 (rluD)
Enzymes [BR:
elb01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
VO54_03243 (rluD)
Ribosome biogenesis [BR:
elb03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
VO54_03243 (rluD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ThiS-like
ThiS
Ub-Mut7C
AbiJ_NTD5
Motif
Other DBs
NCBI-ProteinID:
AJW64674
LinkDB
All DBs
Position
3473618..3474679
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AA seq
353 aa
AA seq
DB search
MTEEENEDLFDDVNDIEISDETGGLYEHLNLVVDKKQEPLRIDKYLLLFRQNSTRNKISQ
TCRAGNVVVNGKPVKQNYRVKPGDEISVLLAHPPRENVIIPENIPVNIIYEDDDLVVVDK
EPGMVVHPGFGNWSGTLVNALAYHFEQNGDKSDLDRVGLVHRIDKDTSGLLVIAKNEYAL
SFLAKQFFDRTTKRLYWAFVWGNVDEDEGTIRGHIGRHLKNRMQMAVYEDGSHGKHAVTH
YKVLERFRYVTWVQCKLETGRTHQIRAHFKHIGHTLFNDERYEGHTILRGINLPKYKQFV
QNIFDVLPRHALHAHTLGFIHPTTKKEMFFESPMPEDMSTAVEKWRNYLSNNG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaagaaaatgaagacctttttgatgatgttaatgatatagagatatcagat
gaaaccggaggtctttacgagcatcttaatttagttgtcgataaaaagcaggaacccctg
cgtatagataaatatctgctgttattcagacagaattctacaagaaataaaatttcgcaa
acatgtcgtgccggtaatgttgtggttaacggtaagcctgttaaacaaaactacagagta
aaaccaggtgatgaaataagcgttctactggcgcatccgccaagagagaatgttattatt
cctgaaaatattccggttaatattatttatgaggatgatgatcttgttgtagtagacaag
gagccaggaatggtagtgcatccaggatttggaaactggagcggaactcttgtcaatgca
ttggcataccattttgaacaaaacggagataaatcggacctggatcgtgtaggtcttgtc
caccgtatagataaagatacttccgggttattggtaattgccaagaatgaatatgcatta
agctttcttgcaaaacaatttttcgacagaacgacaaaacgtttgtattgggcttttgta
tggggtaatgtagatgaggatgaagggaccatcagagggcatatcggaaggcatcttaaa
aaccgtatgcaaatggccgtgtatgaagatggcagtcatggaaaacatgctgtaacgcat
tataaggtattggaacgcttccgttatgtgacctgggtacagtgtaagctggaaaccgga
agaacgcatcagatcagagcacattttaagcatataggacatactttgtttaatgacgaa
cgttatgaaggacataccatactgagaggaataaaccttccaaaatataaacagtttgtt
cagaatatttttgatgttttaccacgtcatgctttacatgctcataccttaggatttata
catccgacgactaaaaaagaaatgttctttgaaagtcctatgccggaagatatgagtaca
gcagttgaaaagtggcgaaattatctgtccaacaacggataa
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