Escherichia coli clone D i2: i02_0340
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Entry
i02_0340 CDS
T02004
Name
(GenBank) putative cytoplasmic membrane export protein
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
eld
Escherichia coli clone D i2
Pathway
eld02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
i02_0340
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
eld02000
]
i02_0340
02044 Secretion system [BR:
eld02044
]
i02_0340
Transporters [BR:
eld02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
i02_0340
Secretion system [BR:
eld02044
]
Type I secretion system
Adhesin protein transporter
i02_0340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
ABC_membrane
SMC_N
7tm_7
tRNA_lig_kinase
AAA_29
AAA_22
Motif
Other DBs
NCBI-ProteinID:
AER82935
LinkDB
All DBs
Position
340218..342365
Genome browser
AA seq
715 aa
AA seq
DB search
MKSIFEGLSQITALLGTPVSAETLAAGTVRTDVSGIDFRSVGEFLRSEGFDNHLSRRSPE
DIPSLAVPALLLLNAQEAIVVVRIEGAGLARQYHVLQPGGLRKTLSHDALMAVYSGYCWF
VQPQAKQDRRSELPEYDMSGAWFWRVLWRFRAYYGQVIVASFIINFLALVSSLYVMNVYD
RVIPNRSWETLWMLSIGVITAILFECAAKLIRSYLTDVAGKKADLIISSALLRRVMAVKM
SDRPASSGSYASNLREYESVREFMTSATLLAFVDLPFILLFISVIGLVGGWLAVVPLTLV
PLVILAGILLQRPLSRHINASMRESSQRQGLLVEALDGIETLKLNNAVNWVQRRWDGYTA
SVARSSIRVKNTSNVIISFSTAIQQINTVLLVILGTYLIHSDDPHNRITMGALIAAVILS
GRALAPLGQIASLATRFQQARLAMQGVNEIVRRPVERESQTHYLTVKDIQGEFHFSAVTF
FYKPELPAALKGMSVCIRPGEKVGIIGTIGCGKSTLLKMMVGLYRQNKGQITLDGVAMQQ
LDPCFVRDKVFLLEQNPRLFLGTLRENLQLSRLPGSLSDVDMINAAGRFGFDRFIRHHPC
GLDMQIGEGGQGLSGGQRQMVALTRMVLGSPRVVLLDEPTTGLDLQTENIVLKGLNHWSR
GRTMVVVTHRLQVLNIVDRIIVMNEGRVMMDGPRDEILKKLSGKQQSGESRAITS
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagtatttttgaaggattatcacagataacggcgttactgggtacacctgtatct
gctgagactctggctgccggtactgtccgtacagatgtatccgggattgattttcgttct
gttggcgagtttcttcgtagtgaaggatttgataatcatctttcccggcgatctccggaa
gatatcccgtcacttgcggttccggcgcttcttttattgaacgctcaggaagctattgtg
gtagtgcgtattgagggggccggtctggcaagacagtatcatgtgcttcagcctggaggt
ctccgtaagacactttctcacgatgcattaatggccgtttattctggttattgttggttt
gttcagccacaggcaaagcaggatcgtcgctcggagctgccagagtatgacatgagcggg
gcatggttctggcgggtactgtggcgattcagggcatattacggacaggttattgttgcg
agttttatcattaactttcttgctctggtcagttccctgtatgtaatgaacgtctatgac
cgggttatacctaatcgttcctgggaaacgttatggatgctgagtatcggggtgattaca
gcaattctgtttgagtgtgctgcaaagttaatccggagttatctgacggatgttgcgggt
aagaaggcagacctgattatcagctctgctctgctacgtcgggtgatggcggtaaaaatg
tctgacaggccggcatcctctggttcatacgccagcaatttgcgggaatatgagtctgtc
agggagtttatgaccagcgctacgttactggcttttgttgatctgccttttattctgctt
ttcatcagtgttatcgggctcgtgggaggctggcttgcggttgtacctcttacgctggtc
ccgctggttattctggcaggaatattactgcagcgaccgctttcccgtcatattaatgcc
tccatgcgggaatcatcgcagcgtcagggattacttgtggaggctctggacggaatagaa
accctgaagctgaataatgctgttaactgggttcagcgacgctgggatggatatactgca
agtgtcgcccgttcgtccattcgggtaaaaaataccagtaatgtcataatcagcttttcc
acagcaattcagcaaattaatactgttctgctggtcattctgggaacgtaccttattcac
agtgatgacccacataaccgtatcaccatgggggcactgattgcagccgttattctttcc
ggccgcgcgcttgcaccgcttggccagatagcatcactggccacccgtttccagcaggcc
cgtctggctatgcagggggtgaatgaaatagttcgccgcccggtggaacgggaaagtcag
acacattatctgaccgtgaaggatatccagggggaattccatttcagcgcagtcacgttt
ttctataagcctgaattacctgcagccttgaaaggtatgtctgtctgtatccggcccgga
gaaaaggtgggcattattggcactatcggatgtggtaaatcgacgctactgaaaatgatg
gtagggctataccgtcaaaataaaggacaaattacccttgacggggttgctatgcagcaa
ctggatccctgttttgttcgggataaggttttcctgcttgagcagaatccccggcttttt
ctgggaactctgcgtgaaaatctgcagctttcgcgtcttccgggaagcctgtcggatgtg
gatatgattaatgcagccggacgtttcgggtttgaccgttttattcgtcatcacccatgc
gggcttgatatgcagataggggaaggaggtcaggggctgtcaggaggacagcgtcagatg
gtcgctctgacgagaatggtactgggttctccccgggtagttctgcttgatgaacccacg
acgggtcttgatctgcagacagagaacattgttctgaaagggctgaatcactggagccgt
ggacgcacaatggtggtggtgacgcatcgtctgcaggtgctgaatattgttgaccgtatt
atcgtgatgaatgaaggccgggtaatgatggatggtccccgcgatgaaatactgaaaaaa
ctgtcagggaaacagcagagtggggagagcagagcgataacttcatga
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