Escherichia coli clone D i2: i02_1253
Help
Entry
i02_1253 CDS
T02004
Symbol
holB
Name
(GenBank) DNA polymerase III subunit delta'
KO
K02341
DNA polymerase III subunit delta' [EC:
2.7.7.7
]
Organism
eld
Escherichia coli clone D i2
Pathway
eld03030
DNA replication
eld03430
Mismatch repair
eld03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
i02_1253 (holB)
03430 Mismatch repair
i02_1253 (holB)
03440 Homologous recombination
i02_1253 (holB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
eld03032
]
i02_1253 (holB)
03400 DNA repair and recombination proteins [BR:
eld03400
]
i02_1253 (holB)
Enzymes [BR:
eld01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
i02_1253 (holB)
DNA replication proteins [BR:
eld03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
i02_1253 (holB)
DNA repair and recombination proteins [BR:
eld03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
i02_1253 (holB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
DNApol3-delta_C
HolB_lid
EPF
Motif
Other DBs
NCBI-ProteinID:
AER83834
LinkDB
All DBs
Position
1261443..1262447
Genome browser
AA seq
334 aa
AA seq
DB search
MRWYPWLRPDFEKLVASYQAGRGHHALLIQALPGMGDDALIYALSRYLLCQQPQGHKSCG
HCRGCQLMQAGTHPDYYTLAPEKGKNALGIDAVREVTEKLNEHARLGGAKVVWVTDAALL
TDAAANALLKTLEEPPAETWFFLATREPERLLATLRSRCRLHYLAPPPEQYAVTWLSREV
TMSQDALLAALRLSAGSPGAALALFQGDNWQARETLCQALAYSVQSGDWYSLLAALNHEQ
APARLHWLATLLMDALKRHYGAAHVTNVDVPGLVVELANHLSPSRLQAILGDVCHIREQL
MSVTGINRELLITDLLLRIEHYLQPGVVLPVPHL
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgagatggtatccatggttacgacctgatttcgaaaaactggtagccagctatcaggcc
ggaagaggtcaccatgcgctactcattcaggcgttaccgggcatgggtgatgatgcttta
atctacgccctgagccgttatttactctgccaacaaccgcagggccacaaaagttgcggt
cactgtcgtggatgtcagttgatgcaggctggcacacatcccgattactacaccctggct
cccgaaaaagggaaaaatgcgctgggcattgatgcggtacgtgaggtcaccgaaaagctg
aatgagcacgcacgcttaggtggtgcgaaagttgtctgggtaaccgatgctgccttacta
accgacgccgcggctaacgcattgctgaaaacgcttgaagagccaccagcagaaacgtgg
tttttccttgctacccgcgagccagaacgtttactggcaacattacgtagtcgttgtcgg
ttacattaccttgcgccgccgccggaacagtacgccgtgacctggctttcacgcgaagtg
acaatgtcacaggatgcactacttgccgcattgcgcttaagcgccggttcgcctggggcg
gcactggcgttgtttcagggagataactggcaggctcgtgaaacattgtgtcaggcgctg
gcatatagcgtgcaatcgggcgactggtattcgctgctggcggcccttaatcatgaacaa
gctccggcgcgtttacactggctggcaacgttgctgatggatgcgctaaaacgccattat
ggcgctgcgcacgtgaccaatgttgatgtgccggggctggtcgtcgaactggcaaaccat
ctttctccctcgcgcctgcaggctatactgggggatgtttgccacattcgtgaacagtta
atgtctgtcacaggtatcaaccgcgagcttctcatcaccgatcttttactgcgtattgag
cattacctgcaaccgggcgttgtgctaccggttcctcatctttaa
DBGET
integrated database retrieval system
