KEGG   Escherichia coli clone D i2: i02_1268
Entry
i02_1268          CDS       T02004                                 
Symbol
ycfS
Name
(GenBank) hypothetical protein
  KO
K19236  L,D-transpeptidase YcfS
Organism
eld  Escherichia coli clone D i2
Pathway
eld01503  Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:eld00001]
 09160 Human Diseases
  09175 Drug resistance: antimicrobial
   01503 Cationic antimicrobial peptide (CAMP) resistance
    i02_1268 (ycfS)
 09180 Brite Hierarchies
  09181 Protein families: metabolism
   01002 Peptidases and inhibitors [BR:eld01002]
    i02_1268 (ycfS)
   01011 Peptidoglycan biosynthesis and degradation proteins [BR:eld01011]
    i02_1268 (ycfS)
Peptidases and inhibitors [BR:eld01002]
 Cysteine peptidases
  Family C82
   i02_1268 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:eld01011]
 Peptidoglycan biosynthesis and degradation
  Transpeptidase
   i02_1268 (ycfS)
SSDB
Motif
Pfam: Ldt_C YkuD LysM DUF6518
Other DBs
NCBI-ProteinID: AER83849
LinkDB
Position
complement(1275109..1276242)
AA seq 377 aa
MNWKRTRSLDGKSGASLRPHLQYLQILCTSLHYPTLSPSIIQTYFFITITLYLLLTLVMI
KTRFSRWLTFFTFAAAVALALPAKANTWPLPSADSRLVGENKFHVVENDGGSLEAIAKKY
NVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKNSV
TVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPDNP
MGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNIINT
PIKISAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMDVR
SGMPVDVRRHQVSPQTL
NT seq 1134 nt   +upstreamnt  +downstreamnt
gtgaactggaagagaacgcgatcgcttgatggtaaatcgggggcgtctctgcgcccccat
ctgcaatatttacaaattctttgcacttccctgcattatccgacactgtcaccctccata
attcagacttacttttttattacaataaccttatatttattattgactttggtgatgatc
aaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcgctggcg
ctaccggcaaaagccaacacctggccgctgccgtcagcggacagtcgtctggttggtgaa
aacaaatttcatgtggtggaaaatgacggtggttctctggaagcgatcgccaaaaaatat
aacgtcggctttctcgctctgttacaggctaaccccggcgttgatccttacgtaccgcgc
gcgggtagcgtgttaacgatcccgttgcaaaccctacttccagacgcgccgcgcgaaggc
attgtgatcaacattgcggagctgcgtctctattattatccgccgggaaaaaattcggta
accgtatatcccatcggcattggtcagttaggtggtgacacgctgacaccgacaatggtg
accactgtttctgacaagcgtgcaaacccaacctggacgccaacggcaaacattcgcgcg
cggtataaggcacagggaattgagttgcctgcggtagttccggctggaccggataaccca
atgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcacggtacg
aacgctgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgggatgac
gatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatcaacacc
ccgattaaaatctctgccgaaccaaacggtgcgcgtctggttgaagtacatcagccgctg
tcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgcaatgcaa
tcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggatgtccgt
tccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa

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