Escherichia coli clone D i2: i02_3082
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Entry
i02_3082 CDS
T02004
Symbol
yqcB
Name
(GenBank) tRNA pseudouridine synthase C
KO
K06175
tRNA pseudouridine65 synthase [EC:
5.4.99.26
]
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eld03016
]
i02_3082 (yqcB)
Enzymes [BR:
eld01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.26 tRNA pseudouridine65 synthase
i02_3082 (yqcB)
Transfer RNA biogenesis [BR:
eld03016
]
Prokaryotic type
tRNA modification factors
Psudouridine synthases
i02_3082 (yqcB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Motif
Other DBs
NCBI-ProteinID:
AER85625
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All DBs
Position
complement(3086354..3087136)
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AA seq
260 aa
AA seq
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MLEILYQDEWLVAVNKPSGWLVHRSWLDRDEKVVVMQTVRDQIGQHVFTAHRLDRPTSGV
LLMGLSSEAGRLLAQQFEQHQIQKRYHAIVRGWLMEEAVLDYPLVEELDKIADKFAREDK
GPQPAVTHYRGLATVEMPVATGRYPTTRYGLVELEPKTGRKHQLRRHLAHLRHPIIGDSK
HGDLRQNRSGAEHFGLQRLMLHASQLSLTHPFTGEPLAIHAGLDDTWMQALSQFGWRGLL
PENERVEFSAPSGQDGEISS
NT seq
783 nt
NT seq
+upstream
nt +downstream
nt
atgctggaaatactctatcaggatgaatggctggttgcggtaaataaaccctccggctgg
ctggttcaccgcagctggctggatcgcgacgagaaagtagtggtcatgcaaaccgtgcgt
gaccagataggccagcatgtttttactgctcatcgtctggaccgaccaacttctggtgtg
ttgttgatgggattatccagcgaagccggacggctgctggcacaacagtttgaacagcac
caaatccagaaacgttaccatgcgattgtgcgtggctggttgatggaagaagcggtgctg
gattatccactggtggaagaactggacaaaatcgctgataaatttgcccgcgaagataaa
ggcccgcagccagcagtgacgcattatcgcggtctggcgaccgtagaaatgccggtagcg
accggacgttacccgaccacgcgctacggcctggtggaactggagccgaaaactggacgc
aagcaccagcttcgtcgccatcttgcccatttgcggcacccgattattggcgacagcaaa
catggtgatttacgccagaatcgcagcggcgctgagcattttggccttcagcggttaatg
ctgcatgccagtcagttgtcattgacgcatccttttactggcgagccgctggctattcac
gcgggcctggacgacacctggatgcaggcattatcacaatttggctggcgcggtctgctt
cctgaaaatgaaagggttgagttcagtgcgccatcgggtcaggatggagagataagttcc
taa
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