Escherichia coli clone D i2: i02_3105
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Entry
i02_3105 CDS
T02004
Symbol
ygdL
Name
(GenBank) hypothetical protein
KO
K22132
tRNA threonylcarbamoyladenosine dehydratase
Organism
eld
Escherichia coli clone D i2
Brite
KEGG Orthology (KO) [BR:
eld00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eld03016
]
i02_3105 (ygdL)
Transfer RNA biogenesis [BR:
eld03016
]
Prokaryotic type
tRNA modification factors
Other tRNA modification factors
i02_3105 (ygdL)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ThiF
Sacchrp_dh_NADP
UDPG_MGDP_dh_N
DAO
NAD_binding_7
ELFV_dehydrog
3HCDH_N
ApbA
TrkA_N
Motif
Other DBs
NCBI-ProteinID:
AER85648
LinkDB
All DBs
Position
complement(3108438..3109244)
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AA seq
268 aa
AA seq
DB search
MSVVISDAWRQRFGGTARLYGEKALQLFADAHICVVGIGGVGSWAAEALARTGIGAITLI
DMDDVCVTNTNRQIHALRDNVGLAKAEVMAERIRQINPECRVMVVDDFVTPDNVAQYMNA
GYSYVIDAIDSVRPKAALIAYCRRNKIPLVTTGGAGGQIDPTQIQVTDLAKTIQDPLAAK
LRERLKSDFGVVKNSKGKLGVDCVFSTEALVYPQSDGTVCAMKATAEGPKRMDCASGFGA
ATMVTATFGFVAVSHALKKMMAKAARQG
NT seq
807 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtggtaattagtgatgcatggcgtcagcgttttggtggcacagcgcgtctgtat
ggtgaaaaagcattgcaactgtttgctgacgcgcatatttgtgtggttggtatcggtggt
gtcggttcctgggcggcggaagcgctagcgcgcacggggattggcgcaatcacgcttatc
gatatggatgatgtgtgcgtcaccaataccaatcggcaaattcacgctctgcgcgataac
gtcgggctggcaaaagcggaagtcatggcggagcgtattcgccagattaacccggagtgc
cgtgtaatggtggtggatgacttcgtgacgccggataacgtagcgcaatatatgaatgcc
ggttattcgtacgtgattgatgctattgatagtgtacggcccaaagcggcgctgattgct
tattgtcggcgcaataaaatcccgctggtcacgaccggtggcgctggtgggcagattgac
ccgacgcagattcaggttaccgatctggcgaaaacgattcaggacccgttggcggcgaag
ttgcgcgagcgcctgaaaagcgattttggcgtagtgaaaaacagtaaaggtaagctcggc
gtggattgcgtgttctctaccgaagcgctggtgtacccgcagtcagacggcaccgtctgt
gcgatgaaagccacggcggaagggccaaagcggatggattgtgcctcaggatttggcgcg
gcgacgatggtgaccgccacttttggctttgttgcggtttctcatgcgctgaagaagatg
atggcgaaagcggcgcgtcaggggtaa
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