KEGG   Erythrobacter litoralis DSM 8509: Ga0102493_111761Help
Entry
Ga0102493_111761  CDS       T04740                                 

Definition
(GenBank) bifunctional non-homologous end joining protein LigD
  KO
K01971  bifunctional non-homologous end joining protein LigD [EC:6.5.1.1]
Organism
elq  Erythrobacter litoralis DSM 8509
Pathway
elq03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:elq00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    Ga0102493_111761
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:elq03400]
    Ga0102493_111761
Enzymes [BR:elq01000]
 6. Ligases
  6.5  Forming phosphoric-ester bonds
   6.5.1  Ligases that form phosphoric-ester bonds (only sub-subclass identified to date)
    6.5.1.1  DNA ligase (ATP)
     Ga0102493_111761
DNA repair and recombination proteins [BR:elq03400]
 Prokaryotic Type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     Ga0102493_111761
BRITE hierarchy
SSDB OrthologParalogGene clusterGFIT
Motif
Pfam: LigD_N DNA_ligase_A_M DNA_ligase_A_C
Motif
Other DBs
NCBI-ProteinID: AOL22783
UniProt: A0A074MDK5
LinkDB All DBs
Position
complement(858622..861114)
Genome map
AA seq 830 aa AA seqDB search
MARAREKDALAEYNAKRDFDATPEPAGDAGSGTGNSFMVQKHDATRLHWDLRLEMDGVLK
SWAVTKGPSLDPATKRLAVRTEDHPLSYATFEGTIPKDQYGGGTVMLWDRGTWAPVEGTK
ASDIEQGHLHFCLEGERMKGEWLLIRLKPKGNEKRENWLLRKLDDEYAGGTDDLVERELT
SISTGRSMAEIAAGKETAKQQDGSLVARMKPKSGRTRKPRKPAPMPSFRKPQLATLVDDV
PAGNGWMHEIKFDGYRALVAARGEEVRIYTRSGKDWTDKFAPLARAFAGLDLPCALIDGE
IVATDDNGNPDFSTLQAVLKRGHGAQGAGDALSFHAFDLLGAEGEDFAREPNIERKERLE
ALLKRAEPPIHVADHVIGAGERLLKTMCDAGQEGIISKKIDAPYRHSRSKAWVKVKCTRR
QEFVIIGWKPSKAKGRPFSSLLMAQYEGESLVYKGNVGTGFDTGDFDALSARLKRLERKT
PPAEVEKAKARSVRWVTPKLVAEVAFAEFTGDGNIRHGSYLGLREDKDAKDVTPERPSAS
PPPEQEVTISSRERVIFPGSGATKGNLADYYEAVAPIMLPFAANRPVSLVRCPQGRAKKC
FFQKHDNGGFGDAVRRVAIREKDGGHEDYLFIEGARGILQCVQMGTIEFHGWGARTDNVE
APDRMVFDLDPDEGLDFGDVKGAARDIRYRLADLGLTSFAMLSGGKGVHVVVPLLPGHSW
EAHKDFSRRFAEALSLAQPDRFTATMSKAKRKGKIFIDWLRNQRGSTAVLPYSARAREGA
PVAVPLGWNELQEAETAQAFTIGDADRLLKRARGKTLAGWGFAEQRLPDL
NT seq 2493 nt NT seq  +upstreamnt  +downstreamnt
atggcgcgcgcgagggaaaaagacgcgctcgccgaatacaacgccaagcgcgatttcgac
gccacgcccgaacccgccggagatgccggcagcgggacgggcaacagcttcatggtgcaa
aagcacgacgcgacccggctgcactgggacctcaggctcgaaatggacggggtgctgaaa
agctgggcggtgacgaaaggcccctcgctcgacccggcgaccaagcggctggcggtcagg
accgaggatcacccgctgtcctatgcgaccttcgagggcacgatccccaaagaccagtat
ggtggcggcacggtgatgctgtgggaccgcggcacctgggctccggtggaaggcacgaag
gcctccgatatcgagcaggggcatctccatttctgtctcgagggcgagcggatgaagggc
gaatggctgctcatccggctgaagcccaaaggcaatgagaagcgcgagaactggctgctg
cgcaagctcgacgacgaatatgcaggcggcacggatgatctcgtcgagcgcgaactcacc
agcatttcgacgggccgctccatggccgagatcgccgcgggcaaggagacggcaaagcag
caggacggcagcctcgtcgcgcggatgaagcccaaatcgggcagaacgcgaaagccgcgc
aaacccgctccgatgccctccttccgcaagccgcaactcgccacgctcgtcgacgatgtc
ccggcgggcaacggctggatgcacgagataaagttcgacggctaccgcgccctcgttgcc
gccaggggcgaggaagtgcgcatctacactcgttcgggcaaagactggaccgacaagttc
gccccgctcgctcgcgccttcgccgggctcgacctgccttgcgcgctgatcgacggcgaa
atcgtcgccaccgacgacaacggcaatccggacttctcgaccctgcaggccgtgctcaag
cgcggtcacggggcgcagggggcaggtgatgcgctgtcattccacgccttcgaccttctc
ggggcggagggcgaggatttcgcacgcgaacccaatatcgaacgcaaggagcgactggag
gcgctgctgaagcgcgcagagccgccgatccacgtcgccgatcacgtcatcggtgcgggc
gagcggcttctgaaaacgatgtgcgatgccgggcaggaagggatcatttccaagaagatc
gacgcgccctaccgacattcgcgcagcaaggcctgggtcaaggtcaagtgcacgaggcgg
caggaattcgtcatcatcggctggaaaccgtcaaaggcaaagggccgccccttttcctct
ttgctgatggcccagtacgaaggcgagtcgctggtctacaagggcaatgtcgggacaggc
ttcgacacaggcgatttcgacgcgctgtcggccaggctcaaacggctcgaaaggaagact
ccccccgccgaagtcgaaaaggccaaggcacgctcggtgcgctgggtgacgccgaaactg
gtagccgaagtcgccttcgccgagtttaccggcgatggaaacattcgccacggcagctat
ctggggctgcgcgaagacaaggacgcaaaggacgtgaccccggagcgaccttctgcctcc
cctccgcccgagcaggaggtcacgatctccagccgtgaaagggtcatctttcccggctcg
ggtgcgaccaagggcaaccttgccgattactacgaggcggtggcgccgatcatgctgccc
ttcgccgccaatcgcccggtcagcctcgtgcgctgcccgcaggggcgggcgaagaaatgc
ttcttccagaaacacgacaatggcggcttcggcgacgcagtgcgccgtgtcgcgatccgc
gaaaaggacggcgggcacgaggactatctcttcatcgagggcgcgcgcgggatcctgcaa
tgcgtccagatgggcacgatcgaattccacggctggggcgcgcgcaccgacaatgtcgag
gcgcccgaccggatggtgttcgacctcgacccggacgagggcctcgatttcggcgacgtg
aaaggcgccgcgcgcgacatccgctaccggctcgccgatctcggcctcaccagcttcgcc
atgctttcgggcggcaagggcgtccatgtcgtcgtcccgctcctgccaggccattcatgg
gaagcgcacaaggatttctcgcgccgctttgccgaagcgctgagcctcgcccagcccgac
cgcttcaccgcgacgatgagcaaggcgaagcgcaagggaaagatcttcatcgactggctg
cgcaaccagcgcggcagcaccgcggtcctgccctattcggcccgcgcgcgcgagggcgcg
ccggtcgcagtcccgctcggctggaacgaattgcaggaggccgagacggcgcaggccttc
acgatcggcgatgcggacaggctgctcaaacgcgcccgcggcaagacgctcgccggatgg
ggcttcgccgagcagcgcctgcccgacctctag

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