Escherichia coli O55 H7 RM12579 (EPEC): ECO55CA74_15330
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Entry
ECO55CA74_15330 CDS
T02066
Symbol
rnc
Name
(GenBank) ribonuclease III
KO
K03685
ribonuclease III [EC:
3.1.26.3
]
Organism
elr
Escherichia coli O55:H7 RM12579 (EPEC)
Brite
KEGG Orthology (KO) [BR:
elr00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
elr03019
]
ECO55CA74_15330 (rnc)
03009 Ribosome biogenesis [BR:
elr03009
]
ECO55CA74_15330 (rnc)
03036 Chromosome and associated proteins [BR:
elr03036
]
ECO55CA74_15330 (rnc)
Enzymes [BR:
elr01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.3 ribonuclease III
ECO55CA74_15330 (rnc)
Messenger RNA biogenesis [BR:
elr03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
ECO55CA74_15330 (rnc)
Ribosome biogenesis [BR:
elr03009
]
Eukaryotic type
90S particles
RNase
ECO55CA74_15330 (rnc)
Prokaryotic type
rRNA processing factors
ECO55CA74_15330 (rnc)
Chromosome and associated proteins [BR:
elr03036
]
Eukaryotic type
Gene silencing
microRNA pathway
Microprocessor complex
ECO55CA74_15330 (rnc)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ribonucleas_3_3
Ribonuclease_3
dsrm
DND1_DSRM
Motif
Other DBs
NCBI-ProteinID:
AEZ41636
LinkDB
All DBs
Position
complement(3175069..3175749)
Genome browser
AA seq
226 aa
AA seq
DB search
MNPIVINRLQRKLGYTFNHQELLQQALTHRSASSKHNERLEFLGDSILSYVIANALYHRF
PRVDEGDMSRMRATLVRGNTLAELAREFELGECLRLGPGELKSGGFRRESILADTVEALI
GGVFLDSDIQTVEKLILNWYQTRLDEISPGDKQKDPKTRLQEYLQGRHLPLPTYLVVQVR
GEAHDQEFTIHCQVSGLSEPVVGTGSSRRKAEQAAAEQALKKLELE
NT seq
681 nt
NT seq
+upstream
nt +downstream
nt
atgaaccccatcgtaattaatcggcttcaacggaagctgggctacacttttaatcatcag
gaactgttgcagcaggcattaactcatcgtagtgccagcagcaaacataacgagcgttta
gaatttttaggcgactctattctgagctacgttatcgccaatgcgctttatcaccgtttc
cctcgtgtggatgaaggcgatatgagccggatgcgcgccacgctggtccgtggcaatacg
ctggcggaactggcgcgcgaatttgagttaggcgagtgcttacgtttaggaccaggtgaa
cttaaaagcggtggatttcgtcgtgagtcaattctcgccgacaccgtcgaagcattaatt
ggtggcgtattcctcgacagtgatattcaaaccgtcgagaaattaatcctcaactggtat
caaactcgtctggacgaaattagcccaggcgataaacaaaaagatccgaaaacgcgcttg
caagaatatttgcagggtcgtcatctgccgctgccgacttatctggtagttcaggtccgt
ggcgaagcgcacgatcaggaatttacaatccactgccaggtcagcggcctgagtgaaccg
gtggttggcacaggttcaagccgtcgtaaggctgagcaggctgccgccgaacaggcgttg
aaaaaactggagctggaatga
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