Esox lucius (northern pike): 105013346
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Entry
105013346 CDS
T04894
Symbol
rab5c
Name
(RefSeq) ras-related protein Rab-5C
KO
K07889
Ras-related protein Rab-5C
Organism
els
Esox lucius (northern pike)
Pathway
els04137
Mitophagy - animal
els04144
Endocytosis
els04145
Phagosome
els04148
Efferocytosis
els05132
Salmonella infection
Brite
KEGG Orthology (KO) [BR:
els00001
]
09140 Cellular Processes
09141 Transport and catabolism
04144 Endocytosis
105013346 (rab5c)
04145 Phagosome
105013346 (rab5c)
04137 Mitophagy - animal
105013346 (rab5c)
04148 Efferocytosis
105013346 (rab5c)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
105013346 (rab5c)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
els04131
]
105013346 (rab5c)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
els04147
]
105013346 (rab5c)
04031 GTP-binding proteins [BR:
els04031
]
105013346 (rab5c)
Membrane trafficking [BR:
els04131
]
Endocytosis
Rab GTPases and associated proteins
Rab GTPases
105013346 (rab5c)
Endosome - Lysosome transport
105013346 (rab5c)
Exosome [BR:
els04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
105013346 (rab5c)
Exosomal proteins of other body fluids (saliva and urine)
105013346 (rab5c)
Exosomal proteins of colorectal cancer cells
105013346 (rab5c)
Exosomal proteins of bladder cancer cells
105013346 (rab5c)
GTP-binding proteins [BR:
els04031
]
Small (monomeric) G-proteins
Rab Family
Rab5/17/22/31 [OT]
105013346 (rab5c)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ras
Roc
Arf
MMR_HSR1
GTP_EFTU
Gtr1_RagA
RsgA_GTPase
AAA_16
MCR_beta
BrnT_toxin
Motif
Other DBs
NCBI-GeneID:
105013346
NCBI-ProteinID:
XP_010873110
UniProt:
A0A3P8YRI6
LinkDB
All DBs
Position
LG11:12933878..12960745
Genome browser
AA seq
217 aa
AA seq
DB search
MAGRGGPARTNGAAASNKICQFKLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLT
QTVCLDDTTVKFEIWDTAGQERYHSLAPMYYRGAQAAIVVYDITNTDTFTRAKNWVKELQ
RQASPNIVIALAGNKADLANKRAVDFQEAQAYADDNSLLFMETSAKTAMNVNEIFMAIAK
KLPKNDPAGGAGAVGRARQGVDLQEAAPQGSGGKCCP
NT seq
654 nt
NT seq
+upstream
nt +downstream
nt
atggcaggtcgaggaggaccagcgcggaccaatggcgcagcggccagcaacaaaatctgc
cagtttaagctagtgctgctgggagagtcggcggtgggcaagtccagcttggtgctgcgc
ttcgtgaagggccagttccacgagtaccaggagagcaccatcggagcggcttttctcaca
cagactgtctgcttggacgacacaacagtgaagtttgagatttgggacacagcaggtcaa
gagcggtatcacagcctggccccaatgtactacagaggagcacaggcagccatagtggtc
tatgacatcaccaacacagatacattcacacgtgcaaagaactgggtgaaggagctccag
cgacaagcaagccctaacattgtcattgccctggccgggaacaaagctgacctggccaac
aaaagagctgtggacttccaggaagcacaagcatatgcagatgacaatagtttgctgttc
atggagacctctgctaagactgccatgaacgtcaatgagatcttcatggctatagccaag
aagctacctaaaaacgatccagctggtggagccggagctgttggccgggcccggcaagga
gttgacctgcaggaagccgctccacagggcagtggaggcaagtgctgtccttag
DBGET
integrated database retrieval system