Escherichia coli W: ECW_m1221
Help
Entry
ECW_m1221 CDS
T02002
Symbol
ycfS
Name
(GenBank) L,D-transpeptidase linking LPP to murein
KO
K19236
L,D-transpeptidase YcfS
Organism
elw
Escherichia coli W
Pathway
elw01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
elw00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ECW_m1221 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
elw01002
]
ECW_m1221 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
elw01011
]
ECW_m1221 (ycfS)
Peptidases and inhibitors [BR:
elw01002
]
Cysteine peptidases
Family C82
ECW_m1221 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
elw01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECW_m1221 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
ADT74717
UniProt:
E0IVC5
LinkDB
All DBs
Position
complement(1277371..1278330)
Genome browser
AA seq
319 aa
AA seq
DB search
MIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIAK
KYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGKN
SVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGPD
NPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNII
NTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVMD
VRSGMPVDVRRHQVSPQTL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtggcg
ctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctggtt
ggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgccaaa
aaatataacgtcggctttctcgctctgttacaggctaaccctggcgttgatccttacgta
ccgcgcgcgggtagcgtgttaacgatcccgttgcaaaccctacttccagatgcgccgcgc
gaaggcattgtgatcaatattgcggagctgcgtctctattactacccgccgggtaaaaat
tcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccgaca
atggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaacatc
cgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccggat
aacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgcttcac
ggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctgcgg
gatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatcatc
aacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacatcag
ccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagcgca
atgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatggat
gtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctgtaa
DBGET
integrated database retrieval system
