Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_0531
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Entry
CDCO157_0531 CDS
T02122
Name
(GenBank) putative ATP-binding component of a transport system
KO
K12541
ATP-binding cassette, subfamily C, bacterial LapB
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CDCO157_0531
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
elx02000
]
CDCO157_0531
02044 Secretion system [BR:
elx02044
]
CDCO157_0531
Transporters [BR:
elx02000
]
ABC transporters, eukaryotic type
ABCC (CFTR/MRP) subfamily
ABCC-BAC subgroup
CDCO157_0531
Secretion system [BR:
elx02044
]
Type I secretion system
Adhesin protein transporter
CDCO157_0531
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
AAA_21
SMC_N
AAA_29
Pex24p
MMR_HSR1
AAA_23
Peptidase_C39
Dynamin_N
RsgA_GTPase
nSTAND3
ATP-synt_ab
NACHT
YobI-ATPase
Motif
Other DBs
NCBI-ProteinID:
AFJ27577
LinkDB
All DBs
Position
602878..604998
Genome browser
AA seq
706 aa
AA seq
DB search
MIAVARYYRLDFSQENVRATVNWERDSKREELLTDMARQLGMGLRLVEFSADSLNPWRLP
LIAVFDNQQIGVITRRDNHDNISVQFSGDEGLETTLNVADIEDKIVELALLRPLSAIPDA
RVDDYIRPYQANWFWSLSLKDWRRYGDIMLASLVANVLALAAMIFSMQVYDRVVPAQSYP
TLWVLFAGVMMAILFEFCMRMVRTHLSDVIGKRADLRISDRVFGHALRLKNNVRSKSTGS
FISQIRELESVRELITSTTIGAVADLPFFLLFVFILWMIGGWLVLVVLLALPLLVIPGLL
VQRPLARLANEGMRESAVRNATLVEAVQSIEDIKLLRAEQRFQNQWNHTNDVASSISMKQ
RFLTGLLLTWTQEVQSIVYVVVLLVGCFMVMNGDMTTGALVGTTILASRTIAPLSQISGV
LSRWQQAKVARNGLDELMKRPVDQPEHGKLVHKAVLHGNYQFSNAVFYYDEEEKIADVAI
GKLNIQAGEKIAILGRNGAGKSTLLQMLAGMRIAQQGQVLLDNISIGQLDPADLRRDMGL
LSQTGRLFFGSLRENLTMGMPEASDEDIERALTLSGALPFVQKQKNGLNYMIQEGGFGLS
GGQRQTLLLARLLISQPNIVLLDEPSASLDEMAEAYLIEQLKQWIGHRTLIIATHRTAML
QLVDRIIVMDQGRIVMDGAKEAILREQGEPTARRVVLQEKNKGSAA
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
atgatcgccgtggcgcgctattatcggctcgatttttctcaggagaatgtgcgcgcgacc
gtcaactgggagcgcgacagtaagcgggaggagttactcaccgacatggcgcggcagtta
gggatggggttgcggttggtggagttttccgccgattcgcttaacccctggcgtctgccg
ctgatcgcggtgtttgataatcagcagattggcgtgatcacccgtcgcgacaatcatgac
aatatcagcgttcagttcagcggtgacgaagggctggaaactacacttaacgtcgcggat
attgaagataaaatcgtcgaactggcgctgctgcgccctctcagcgccatccctgacgcg
cgggtggatgactatattcgcccgtatcaggcgaactggttctggagtctttcgctaaaa
gactggcggcgctacggcgatattatgctggcgtcactggtggcgaacgtgctggcgctg
gcggcgatgattttctcgatgcaggtttacgatcgggtggttccggcgcaatcgtacccg
acgctatgggtgcttttcgccggggtgatgatggcgatcctgtttgagttctgtatgcgc
atggtgcgtacgcatctatctgatgtgatcggaaagcgggcagacctgcgtatttcggat
cgcgtttttggtcatgcgctacggctgaaaaacaacgtgcgatcgaaatccaccggatcg
tttatctcgcagatccgcgaactggaatcagtgcgggagcttattacgtccaccaccatc
ggcgcggtggcggacctgccattcttcctgctgtttgtctttattttgtggatgatcggc
ggctggctggtgctggtggttttgctggcgctgccgttgctggtgatccccggcctgctg
gtgcaacgcccgctggcgcggctggcgaacgaaggaatgcgcgagtcagcggtacgcaac
gctacgctggtggaagccgtgcagtcgattgaagatattaaactgctgcgcgccgaacag
cgttttcagaatcagtggaaccacaccaacgacgtggcctcgtccatcagcatgaagcaa
cgttttctcaccgggctgctgctcacctggacccaggaagtgcagtccatcgtctacgtg
gtggtgctgctggtgggctgctttatggtgatgaacggcgacatgaccaccggcgcgctg
gtcgggacgacgatcctggcttcgcgcaccattgcgccgctgtcgcagatatccggcgtg
ctctcgcgctggcagcaggcgaaagtagcacgtaacggccttgatgaactgatgaagcgc
ccggtggatcagccggaacacggcaaactggtgcataaagcggtgctgcacggtaattat
cagttcagcaacgcggtgttttattacgacgaagaagagaagattgccgatgtagcgatt
ggcaaactcaacattcaggctggtgagaaaatcgccattctcgggcgcaacggcgcgggt
aaatcgacgctactgcaaatgctcgccggaatgcgtatcgcccagcaggggcaggtgttg
ctggataacatcagtatcgggcagcttgatccggcagatctgcggcgagacatggggcta
ctcagccagaccgggcgactgttctttggttcgctgcgggaaaacctcaccatggggatg
ccggaagccagcgatgaagatatcgaacgcgcgttaaccctcagcggagcgctgcccttt
gtgcagaagcagaaaaacggcctcaactacatgattcaggaagggggatttggcctctct
ggtggtcagcggcaaacgctgctgctggcgcggctactcatctctcagccgaatatcgtc
ctgctcgacgaacccagcgcctcactggacgaaatggcagaagcgtatttaatcgaacaa
ctgaaacagtggattgggcatcgcacgctgattatcgccactcaccgcacggcgatgctg
caactggtggataggataatcgtgatggatcaggggcggattgtgatggacggcgcgaaa
gaggccattttgcgtgaacagggcgagcccacagcgcgacgggtggtgttgcaggagaag
aataaggggtctgcggcatga
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