Escherichia coli O157 H7 Xuzhou21 (EHEC): CDCO157_4371
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Entry
CDCO157_4371 CDS
T02122
Symbol
recF
Name
(GenBank) recombination protein F
KO
K03629
DNA replication and repair protein RecF
Organism
elx
Escherichia coli O157:H7 Xuzhou21 (EHEC)
Pathway
elx03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
elx00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
CDCO157_4371 (recF)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
elx03400
]
CDCO157_4371 (recF)
DNA repair and recombination proteins [BR:
elx03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
CDCO157_4371 (recF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
AAA_15
AAA_23
AAA_21
AAA_27
AAA_29
AAA_16
ABC_tran
AAA_13
Motif
Other DBs
NCBI-ProteinID:
AFJ31423
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Position
complement(4593363..4594436)
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AA seq
357 aa
AA seq
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MSLTRLLIRDFRNIETADLALSPGFNFLVGANGSGKTSVLEAIYTLGHGRAFRSLQIGRV
IRHEQEAFVLHGRLQGEERETAIGLTKDKQGDSKVRIDGTDGHKVAELAHLMPMQLITPE
GFTLLNGGPKYRRAFLDWGCFHNEPGFFTAWSNLKRLLKQRNAALRQVTRYEQLRPWDKE
LIPLAEQISTWRAEYSAGIAADMADTCKQFLPEFSLTFSFQRGWEKETEYAEVLERNFER
DRQLTYTAHGPHKADLRIRADGAPVEDTLSRGQLKLLMCALRLAQGEFLTRESGRRCLYL
IDDFASELDDERRGLLASRLKATQSQVFVSAISAEHVIDMSDENSKMFTVEKGKITD
NT seq
1074 nt
NT seq
+upstream
nt +downstream
nt
atgtccctcacccgcttgttgatccgcgatttccgcaacattgaaaccgcggatctcgct
ttatctcccggctttaactttctggtaggtgccaacggcagtggcaaaaccagcgtgctg
gaagccatctatacgctcggccatggtcgggcgtttcgcagtttgcagattggtcgcgtc
attcgccacgagcaggaggcgtttgttctccacgggcgattacagggcgaagagcgcgag
acggcgattggcttaaccaaagacaaacagggcgacagcaaagtccgcatcgacggtact
gacgggcataaagtcgcggaactggcgcacctgatgccaatgcagctgataacgccagaa
gggtttactttactcaacggcggccccaaatacagaagagcattcctcgactggggatgc
tttcacaacgaacccggatttttcaccgcctggagcaatctcaagcgattgctcaagcag
cgcaatgcggcgctgcgccaggtgacacgttacgaacagctacgcccgtgggataaagaa
ctgatcccgctggcggagcaaatcagtacctggcgcgcggagtatagcgccggtatcgcg
gccgatatggctgatacctgtaagcaatttctccctgagttttctctgactttctctttc
cagcgcggctgggagaaagagacagaatatgctgaggtgctggaacgtaattttgaacgc
gatcgccagctaacctacaccgcgcatggcccgcataaagcggacttacgcattcgcgcc
gacggtgcgccggtggaagataccttatcgcgtgggcagcttaagctgttgatgtgcgcc
ttacgtctggcgcaaggagagttcctcacccgtgaaagcgggcggcggtgtctctacctg
atagatgattttgcctctgagcttgatgatgagcgtcgcgggctgcttgccagccgctta
aaagctacgcaatcgcaggtctttgtcagcgcgatcagtgctgaacacgttatagacatg
tcggacgaaaattcgaagatgtttaccgtggaaaagggtaaaataacggattaa
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