Escherichia marmotae: C1192_06130
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Entry
C1192_06130 CDS
T05353
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K05880
transcriptional activator for dhaKLM operon
Organism
ema
Escherichia marmotae
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
ema03000
]
C1192_06130
Transcription factors [BR:
ema03000
]
Prokaryotic type
Other transcription factors
Others
C1192_06130
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
PAS
HTH_8
PAS_4
GAF
PAS_8
AAA_2
Xre-like-HTH
PAS_7
AAA_5
HTH_17
AAA_7
AAA_22
AAA
AAA_16
HTH_50
ELMO_ARM
PAS_9
Motif
Other DBs
NCBI-ProteinID:
AUT26737
LinkDB
All DBs
Position
complement(1153024..1154943)
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AA seq
639 aa
AA seq
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MNGGFNNDSRGLSPLIAASWERCCKLMKRELWSKPHQAQGVTFASICRRKKAMLTLGQAA
LEDAWEYMAPREYALFILDETACILSRYGDPQTLRQLSLLGFSDGTYCAEGIIGTCALSL
AAISGQAVKTKADQHFKQMLWDWAFCATPLFDSKGRLTGTIALACPAEQSTAADLPLTLA
IAREVGNLLLTDSLLAETNRHLNQLNALLESMDDGVISWDEQGNLQFINAQAARVLRLDA
TASQGKAITELLTLPAVLQQAIKQAHPLKHVEATFESQHQFIDAVITLKPIIETQGTSFI
LLLHPVEQMRQLMTSQLGKVSHTFAHMPQDDPQTRRLIHFGRQAARSSFPVLLCGEEGVG
KALLSQAIHNESERAAGPYIAVNCELYGDATLADKLIGSDRPENENGRLSRLELAHGGTL
FLEKIEYLAVELQSALLQVIKQGGITRLDARRLIPIDAKVIATTTADLAMLVEQNRFSRQ
LYYALHAFEITIPPLRMRRGSIPALVNNKLRNLEKRFSTRLKIDDDALARLVSCAWPGND
FELYSVIENLALSSDNGRIRISDLPEHLFTEQATDDVSATRLSTSLSFAEVEKEAIINAA
QVTGGRIQEMSALLGIGRTTLWRKMKQHGIDASQFKRRG
NT seq
1920 nt
NT seq
+upstream
nt +downstream
nt
atgaatggcggttttaacaacgatagccgggggctttctcccttaattgcagcctcctgg
gagcgatgctgtaagctgatgaaacgggagttatggagcaaaccgcaccaggcacagggc
gtaacatttgcttctatttgtcggcgtaaaaaggcgatgctgacgctcgggcaagcggcg
ctggaagatgcctgggaatatatggcaccccgagagtacgccctgtttatccttgatgaa
acggcctgcattcttagccgttatggtgatccgcagacgttgcgccagctcagtctgctg
ggattcagcgacggtacatattgtgctgaagggatcattggcacttgtgcattatcgtta
gcggctatctccggtcaggctgtgaaaacgaaggccgatcaacattttaagcagatgctt
tgggattgggcattttgtgcaacgccactgtttgacagcaaagggcgattgacggggacg
atagccctggcgtgtccggctgaacaatcgacggcagccgatttgccgttgacgctggca
attgctcgcgaggtggggaatttactgctgacggacagtttgcttgctgaaactaatcgg
catttaaatcagcttaacgccctgttagaaagtatggacgatggggtgattagctgggac
gagcagggtaatttgcaatttatcaatgctcaggcggcgcgtgttttgcgtctggacgcg
acggcaagtcagggcaaggcgatcactgaactgttaacgttacccgccgttttgcaacag
gcaataaaacaggcgcatccgctcaaacatgtggaagcgacctttgaaagccagcatcag
tttattgatgcggtcattacccttaaaccgataatagaaacgcagggaaccagctttatt
ctgttgctgcatccggtggaacagatgcggcaattgatgaccagtcaattaggcaaagtt
agtcatacatttgcccatatgccgcaggacgatccgcaaacccgccgcttgattcatttt
ggccgtcaggcggcgcgcagcagttttcctgttctactttgtggggaagagggcgttggt
aaagccctgttaagtcaggcaattcataatgaaagcgagcgggcagcagggccttatatc
gccgtcaattgcgagttatacggtgatgcgacgctggcggacaagcttattggcagcgat
cgcccggagaacgaaaatggtcgcctgagtcggctggaactggcgcacggcggcacgttg
tttcttgaaaaaattgaatatctggcagtggagttacagtctgctttattacaggttatc
aagcaggggggtatcacgcggctggatgcgcggcgtttaataccgattgatgccaaagtc
attgctacaacgaccgcggatctggcaatgctggtggaacaaaatcgctttagccggcaa
ctttattacgcgctgcatgcgtttgaaattactatcccgccgctgcgtatgcggcgcggc
agtattccggcgttggtgaataacaagctgcgcaatctcgaaaaacgtttctcaacccgc
ctgaaaattgatgacgatgcgcttgcccgcctggtttcttgtgcatggcccggcaatgat
tttgaactgtacagcgtcatcgagaaccttgccctgagcagcgataacgggcgaattcgc
atcagtgatttgcctgaacatctgtttaccgaacaggcgacagatgatgtcagcgccaca
cgtctttcaaccagtctgtcatttgcggaagtcgaaaaagaggcaattattaatgcagct
caggttacgggcggacgtattcaggaaatgtctgcattactggggattggtcgcactacg
ctgtggcgaaaaatgaagcaacatggcattgatgcgagtcagttcaaacgccgtggatag
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