Escherichia marmotae: C1192_06670
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Entry
C1192_06670 CDS
T05353
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K19236
L,D-transpeptidase YcfS
Organism
ema
Escherichia marmotae
Pathway
ema01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
ema00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
C1192_06670
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
ema01002
]
C1192_06670
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
ema01011
]
C1192_06670
Peptidases and inhibitors [BR:
ema01002
]
Cysteine peptidases
Family C82
C1192_06670
Peptidoglycan biosynthesis and degradation proteins [BR:
ema01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
C1192_06670
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
AUT26828
UniProt:
A0A7L6L7G2
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All DBs
Position
1251809..1252771
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AA seq
320 aa
AA seq
DB search
MMIKTRFSRWLTYFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQAFKNAARTDAEVMQHVM
DVRSGMPVDVRRHQVNQQAL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgatgatcaaaacacgtttttctcgctggctgacgtattttacgttcgccgcagccgta
gcactggcgctaccggcaaaagccaatacctggccgctgccacctgcgggtagtcgtctg
gttggtgaaaacaaatttcatgtggtggagaatgacggtggttcgctggaagccatcgcc
aaaaaatataacgtcggtttcctggcgctgttacaggccaaccctggcgttgatccgtat
gtaccacgagccggaagcgtgttaacgattccgttgcaaacgctgctgccggatgcgcca
cgtgaaggcattgtgatcaatattgcagagttacgtctctattattatccaccgggtaaa
aattcggtgaccgtatatccgatcggcattggccagttaggcggagacacattgacacca
acaatggtaactaccgtttcggacaagcgagctaacccaacatggacacctaccgcaaac
atccgcgcccgttataaagcccagggcatcgaacttccggctgttgttccggcaggaccg
gataatccgatgggtcatcatgcgatccgtctggcggcctatggcggcgtttatttactt
cacggtacaaacgccgatttcggcattggtatgcgggtaagttccggctgtattcgtctg
cgcgatgacgatatcaaaacacttttcagccaggtcacccctggcaccaaagtgaacatt
atcaacacaccgattaaagtctctgccgagccaaatggcgcacgcctggtagaagtgcat
cagcctctgtcagagaagattgatgacgatccgcaattgttgccgattacgctcaatagt
gcgatgcaggcatttaaaaatgcagcgcgaactgacgccgaagtaatgcagcatgtgatg
gatgtacgttcaggaatgccggtggatgtacgtcgtcatcaagtgaaccaacaagcgttg
taa
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