Eublepharis macularius (Leopard gecko): 129332293
Help
Entry
129332293 CDS
T09084
Symbol
COL13A1
Name
(RefSeq) collagen alpha-1(XIII) chain isoform X1
KO
K16617
collagen type XIII alpha
Organism
emc
Eublepharis macularius (Leopard gecko)
Brite
KEGG Orthology (KO) [BR:
emc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
emc00536
]
129332293 (COL13A1)
Glycosaminoglycan binding proteins [BR:
emc00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
129332293 (COL13A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Motif
Other DBs
NCBI-GeneID:
129332293
NCBI-ProteinID:
XP_054839277
UniProt:
A0AA97JLM3
LinkDB
All DBs
Position
6:complement(113862974..114021469)
Genome browser
AA seq
511 aa
AA seq
DB search
MVAQGLKGQLGEKGAPGEAGMSIIGPRGPPGQPGTRGFPGFPGPIGLDGKPGQPGPKGEM
GIPGPKGQPGFPGQKGEKGQCGDYPHREYLSTTLAALRSNQILTLKGEQGQAGIQGPPGP
PGLPGTPGQPGPTGPPGKAGEPGKPGKDGKGLPGLPGPKGDPGVQGYHGRKGEKGEPGMK
GEPGIPGAKGEKGTLGDPGPPGTLGQKGEKGDCGNSLGGGKGEPGPPGLPGSPGPKGPKG
EPGKNEIVDYNGSINKALQEIQNLALMGPPGLPGVAGPPGPRGQKGEIGLPGPPGRDGEK
GLDGATGVKGDQGMPGPPGLTGPIGLPGLTGEKGEPGAKGDTGDSITGPPGPQGPPGTSG
PHGLPGPKGDPGIDGTKGEKGAHGDKGDRGPLGLPGASGLDGRPGPPGTPGPIGVPGPAG
PKGERGSKGDSGTAGLMGPAGLSGLPGSPGEKGNRGERGKKGSRGPKGDKGDQGAPGLDA
PCPLGEDGLPIQGCWNKILTMDCPVCMCVCT
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atggtggcccagggactaaaggggcaacttggagagaagggagccccaggagaagctggc
atgtctatcatcggtccccgtggccctccgggacagcctggaacaagaggttttcccggg
tttccaggcccaattggtttagatggcaaaccagggcagcctggaccaaagggagaaatg
ggcatacctggtcccaaaggacagccaggatttcctggacaaaaaggagaaaagggtcaa
tgtggagattatcctcacagggaatacctaagtaccacacttgcagctctgcgttctaat
caaatccttacattgaagggagaacaaggacaggcaggaatccaagggcccccagggcct
ccaggcctcccaggaactccaggacaacctggcccaactggtccacctgggaaagcagga
gaaccagggaaaccagggaaggatggaaagggcttgccaggacttcctggaccaaaggga
gaccctggagttcagggataccatggaagaaagggtgaaaagggcgaacctggtatgaag
ggtgaaccagggattccaggagcaaagggtgaaaaaggaactcttggtgatccaggacct
cctggaaccttaggacaaaagggagaaaaaggagattgtggcaattcacttggaggaggt
aaaggggaacctgggccaccaggattacctggatctccaggaccaaagggtcctaaaggg
gaaccgggaaagaatgaaattgtggattacaatggtagtatcaataaagcgttacaggaa
atacaaaacttggccctcatgggacctcctggattgccaggtgtggcaggtccaccagga
ccacgtggacaaaagggagaaattggcctgccaggtcctccaggacgtgatggtgaaaag
ggtcttgatggtgcaactggagtaaaaggtgatcaagggatgccagggcccccaggacta
acaggtcccataggacttccaggtttaactggagagaagggagaacctggagcgaaggga
gacactggggactcaataacagggccaccagggccacaaggaccaccgggaacatcgggt
cctcatggccttccaggacctaagggagatcctggcattgatggaacaaaaggagaaaaa
ggtgcccatggagacaaaggagaccgaggtcccctaggattacctggtgcttcaggttta
gacggcaggcctggcccaccgggcactccaggtccaattggagttccaggaccagcagga
ccaaaaggagagaggggcagtaaaggagactctggaactgcagggttaatggggccagca
ggactttctgggctaccaggctcaccaggagaaaaaggaaaccggggggaaaggggcaag
aaaggctctagggggcctaaaggggataagggagaccaaggagcacctggattagatgca
ccctgtccattgggggaagatggtttgccaattcagggatgctggaataagattttaacc
atggactgtcctgtgtgtatgtgtgtttgtacatag
DBGET
integrated database retrieval system
