Elizabethkingia meningoseptica: BBD33_06420
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Entry
BBD33_06420 CDS
T04744
Name
(GenBank) RNA pseudouridine synthase
KO
K06180
23S rRNA pseudouridine1911/1915/1917 synthase [EC:
5.4.99.23
]
Organism
emg
Elizabethkingia meningoseptica
Brite
KEGG Orthology (KO) [BR:
emg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
emg03009
]
BBD33_06420
Enzymes [BR:
emg01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.23 23S rRNA pseudouridine1911/1915/1917 synthase
BBD33_06420
Ribosome biogenesis [BR:
emg03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
BBD33_06420
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
ThiS-like
AbiJ_NTD5
ThiS
Ub-Mut7C
Motif
Other DBs
NCBI-ProteinID:
AQX04899
LinkDB
All DBs
Position
1388123..1389184
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AA seq
353 aa
AA seq
DB search
MTEEENEGLFEDVNDIEISDETGGLYEHLNLVVDKKQEPLRIDKYLLLFRQNSTRNKISQ
TCRAGNVVVNGKPVKQNYRVKPGDEVSVLLAHPPRENVIIPENIPVNIIYEDDDLVVVDK
EPGMVVHPGFGNWSGTLVNALAYHFEQNGEKSDLDRVGLVHRIDKDTSGLLVIAKNEYAL
SFLAKQFFDRTTKRLYWAFVWGNVDEDEGTIRGHIGRHLKNRMQMAVFEDGSHGKHAVTH
YKVLERFRYMTWVQCKLETGRTHQIRAHFKHIGHTLFNDERYEGHTILRGINLPKYKQFV
QNIFEILPRHALHAHTLGFVHPTTKKEMYFESPMPEDMSTAVEKWRNYLSNNG
NT seq
1062 nt
NT seq
+upstream
nt +downstream
nt
atgacagaagaagaaaatgaaggcctttttgaagatgtaaatgatattgaaatatcagat
gaaaccggaggtctttacgagcatcttaacttagttgttgataagaaacaggaaccttta
cgtatagataaatatctgctgttattcagacagaattctacaagaaataaaatttcacaa
acctgtcgtgccggaaacgtagtggttaacggtaaaccggttaaacaaaactatcgcgtt
aaaccgggagatgaagttagtgtccttttagcacatcctccaagagagaatgttatcatt
cctgaaaatattcctgttaatattatctatgaagacgatgatcttgttgtagtggataaa
gaacccggaatggttgtacatcctggttttggcaactggagcggaacattggtgaatgct
cttgcttatcatttcgaacagaatggcgaaaaatcggatctggatcgtgtaggtctggtt
caccgtatagataaagatacatccgggcttttggtgattgccaaaaacgaatatgccctt
agttttctggctaaacagttttttgacagaacaactaaacgtttgtactgggcgtttgtc
tggggaaatgtggatgaggacgaggggacaatacgcggacatatcggaagacacctgaag
aaccgtatgcagatggctgtctttgaagatggaagccatggaaaacatgcggtaacacat
tataaagtactggagcgtttccgttatatgacctgggtacagtgtaaactggaaaccgga
agaacgcaccagatcagggcgcatttcaaacatatcggtcatactttgttcaatgatgaa
cgctatgaaggacacactattctgagaggaattaatcttccgaagtataagcagtttgtt
cagaatatttttgaaattctgccacgccatgccctgcatgcacatacattaggatttgta
catcctactacgaaaaaagaaatgtactttgaaagtcctatgcctgaagacatgagtact
gctgttgaaaaatggagaaattatctgtcgaataacggataa
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