Exiguobacterium marinum: PTI97_09325
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Entry
PTI97_09325 CDS
T08845
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
emm
Exiguobacterium marinum
Brite
KEGG Orthology (KO) [BR:
emm00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
emm03016
]
PTI97_09325 (thpR)
Enzymes [BR:
emm01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PTI97_09325 (thpR)
Transfer RNA biogenesis [BR:
emm03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PTI97_09325 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
AKAP7_NLS
Motif
Other DBs
NCBI-ProteinID:
WDH75020
LinkDB
All DBs
Position
complement(1809556..1810131)
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AA seq
191 aa
AA seq
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MSRHYFIAIPIEATELIHVQHAILPYYSYRRIYRPDEFHMTIQFLGYVDGEELDEVKEIT
RRICEDTLPFTLTFRSIDHFGRPDRPRVLTIVPDDSEPLQRLAHALRQELVDVIPRLDRK
AFVPHVTLAKKWDAGERVPYVSPEFQVTESVEEVILYEVQPNHTPAYRAVEVFPLRRPEE
DIWQSRLKFLT
NT seq
576 nt
NT seq
+upstream
nt +downstream
nt
atgagtaggcattattttattgcgattcccattgaggcgaccgaactaattcatgtgcag
catgctattttgccttattattcgtatcggcgtatttatcgaccggacgaatttcatatg
acgattcaatttttagggtacgtagacggagaagaactggatgaagtgaaggaaatcaca
cgtagaatctgtgaagatacgctaccgttcacgctgacgtttcgttccatcgaccatttt
ggtagaccagatcgtccacgcgttctgacaatcgtgccagatgattcggagccccttcag
cggttggcgcacgcactccgtcaagaacttgtcgacgtgatcccaagattggatcgaaag
gcgtttgtccctcatgtgacgctcgcaaaaaaatgggatgccggggaacgcgttccctac
gtatcacccgagtttcaagtgactgaatctgtagaagaagtgattctgtatgaagtacaa
ccgaatcatacaccagcctatagggccgtagaagtatttccgttaagacggccagaggag
gacatatggcaatcccggttaaagtttttgacgtaa
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