Endozoicomonas sp. GU-1: O2T12_18520
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Entry
O2T12_18520 CDS
T08918
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
eng
Endozoicomonas sp. GU-1
Pathway
eng03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
eng00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
O2T12_18520 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eng03019
]
O2T12_18520 (recQ)
03400 DNA repair and recombination proteins [BR:
eng03400
]
O2T12_18520 (recQ)
Enzymes [BR:
eng01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
O2T12_18520 (recQ)
Messenger RNA biogenesis [BR:
eng03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
O2T12_18520 (recQ)
DNA repair and recombination proteins [BR:
eng03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
O2T12_18520 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
PrmC_N
Motif
Other DBs
NCBI-ProteinID:
WBA80317
LinkDB
All DBs
Position
complement(4465507..4467333)
Genome browser
AA seq
608 aa
AA seq
DB search
MSDPALDILKNTFGYQSFRGFQQEVINEIVAGRDALVLMPTGGGKSLCYQIPALLRGGTA
VVVSPLIALMDDQINSLRELGIRADCLHSAMLPEDRLQVERELLIGDLDLLYVAPERLLT
ESMQRLLDQIQVALFAIDEAHCVSQWGHDFRPEYLQLSCLQTRFPGVPRIALTATADQRT
RQEIRERLGLGAARVFIDSFNRPNIFYRISQKKQGKQQLLNFLNKEHPEDSGIVYCLSRK
KVEQTAEWLVLSGRKALPYHAGLSPEERRANQHRFIVEEGIIIVATIAFGMGIDKPDVRF
VAHLDLPRSIEAYYQETGRAGRDGLPATAWMVYGLQDVVLLKQLQARSSASVHIQQIEQQ
KLDAMLALCEVTGCRRQVLLNYFDEPLDKPCGYCDLCLEPPEIWDGTEVTRKALSCIYRS
GQSFGVAHLVDILLGKSTDKTRRFGHDRLSTFAIGTELDQSSWRSVYRQLVARGYVNVDH
DSHGALKLNERCRSLLKGDERIQLRRDRYEPSRKYEQEYREVGRVVVEAHDQQLWEALRQ
WRRCHAEEQNVPAYVILNDKTLMELIKVRPQSHLELSRITGIGQFKLEKYGDDLLAVLGS
SQGVTEEC
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
atgtctgatcctgctctggatattttaaaaaatacctttggttaccagtcctttcgagga
ttccagcaagaggtaattaatgaaatcgttgctggccgtgatgccctggtattgatgccg
acagggggagggaagtcgctctgttaccagatccccgcattattaagaggtggtacggca
gttgtcgtttctcctttgattgccttgatggatgaccagattaacagtcttcgggagctg
ggtattcgtgccgactgtctgcactccgccatgctgccggaagaccggctgcaagttgaa
cgggaactgctgatcggtgatctggatttattgtatgtagcaccggaaagactgctgact
gagtcgatgcagcggctgctggatcagattcaggtggctttgtttgctattgatgaggct
cactgtgtctctcagtgggggcacgatttccggccagaatacctgcaactctcctgtttg
caaacacgctttcccggggttcccagaattgccctgacagcgacggccgatcagagaacc
cgccaggaaatccgtgaacgactggggcttggagcagcccgggtatttatcgacagcttt
aaccgacccaatattttctaccggatcagccagaagaagcagggtaagcaacagctactg
aactttcttaataaagagcatcccgaagattccggaattgtttattgcctttcccgtaag
aaagtggagcagactgccgagtggttggtgttgtcagggcgaaaggcgctgccctaccat
gcaggactttcaccggaagaacgtcgggccaaccagcaccggtttatcgtcgaagaaggg
atcattattgtcgcgaccattgcctttggtatggggattgataaaccggatgtgcggttt
gttgcccacctcgacctgccaagaagtattgaagcctattatcaggagaccggacgcgcg
gggcgggatggtctgcccgctaccgcctggatggtttatggcttacaggatgtggtgctg
ctcaaacagctgcaggcccgctccagtgccagcgtgcatattcaacagatagagcagcaa
aagctggatgccatgctggcgctttgtgaggtgaccggatgtcgacgacaggtgttgttg
aattactttgatgagcctctggataaaccctgtggctattgtgacttgtgccttgagcca
ccggaaatatgggatgggaccgaagttacccgcaaggcgttgtcctgtatttaccgcagc
gggcagagcttcggggtggctcatcttgtggatattctgctggggaaaagcaccgataaa
acccgccgttttggtcatgatcgtctgagcacctttgctattggcaccgagctggatcag
agcagctggcggtcggtctatcgtcagttggtggccagagggtacgtgaatgtggatcac
gacagtcatggtgcccttaaactgaatgagcgttgccgttcactgttaaaaggtgatgag
cgtattcagttacgccgtgatcgttatgagccttcccggaagtatgagcaggaataccgg
gaagttggtcgtgtggtggtggaagcccatgatcagcaattgtgggaggctttgcgccaa
tggcgccgttgccatgctgaggaacagaatgtccccgcttatgtcatcctgaacgacaag
accctgatggagctgataaaggttcgtcctcaatcccatcttgaattgtcgagaatcacc
ggaatagggcaattcaagctggagaaatacggcgatgacttattagcagttttggggagc
agccagggcgttaccgaggaatgttaa
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