Euhalothece natronophila: FRE64_03560
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Entry
FRE64_03560 CDS
T06117
Name
(GenBank) RNA polymerase sigma factor, RpoD/SigA family
KO
K03087
RNA polymerase nonessential primary-like sigma factor
Organism
enn
Euhalothece natronophila
Brite
KEGG Orthology (KO) [BR:
enn00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
enn03021
]
FRE64_03560
Transcription machinery [BR:
enn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
FRE64_03560
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Sigma70_r3
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
Sigma70_r4_2
Motif
Other DBs
NCBI-ProteinID:
QDZ39092
UniProt:
A0A5B8NIQ7
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All DBs
Position
complement(763758..764744)
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AA seq
328 aa
AA seq
DB search
MPTAKLDQNNEKPIFSADMVRTYLHEIGRVPLLTHEQEIILGKQVQKMMGLLDQKEELEK
ELGREATEEEWLEKAEISKSELDKIIKEGNRAKRKMIEANLRLVVAIAKKYQKRNMEFLD
LIQEGTLGLERGVEKFDPTRGYKFSTYAYWWIRQAITRAIAQQARAIRLPIHITEKLNKI
KKVQRELAQKLGRNATPTEIATELELEPSQIREYLSIARQPISLDVRVGDNQDTELSELL
EDDENSPETYLTQESMRQDIDIMLSELTPQQREVLSLRFGLEDGNELSLAKVGKKLNLSR
ERVRQLEHQALAKLRRKRGGVAEYIAAS
NT seq
987 nt
NT seq
+upstream
nt +downstream
nt
atgcccactgcaaaattagaccaaaacaacgaaaagccgattttctctgcagacatggtg
cgaacctatcttcatgagatagggcgtgtccccctacttactcacgaacaagagattatc
ttgggtaagcaagtgcagaaaatgatggggctgttagaccaaaaagaagaattagaaaaa
gaactgggacgagaagcaactgaagaggaatggctagagaaagctgagattagcaaatct
gagctagacaaaattattaaagagggcaatcgcgccaagcgcaaaatgatcgaggcgaat
ctgcgtttggtggtggcgatcgcgaaaaaatatcaaaagcgcaacatggaattcttggac
ttaattcaagaaggaacattagggctagagagaggagtagaaaaatttgaccccacaaga
ggctataaattctcaacttatgcctactggtggattcgtcaagctattacccgcgcgatc
gcgcaacaggctcgggcgattcgtttgcccattcatattaccgaaaagctgaataaaatc
aagaaggtacagcgagaactggcgcaaaaactgggacgtaatgcgactcccacagaaatt
gccaccgagttagaactagaaccttcccaaattcgagagtatctcagcattgctcgtcag
ccgatttcccttgatgtccgagttggcgataatcaggatacggaactatcggaactcttg
gaagatgatgaaaattccccagaaacttacctaactcaggaatcaatgcgacaagacatt
gatattatgctctctgagttgacccctcaacaacgggaagtgttatccttacgctttggc
ttagaagatggcaatgagctatccttagcgaaggtgggtaagaaacttaacctcagtcgg
gaacgagtccgccaactcgaacatcaagccttagctaaactgcgtagaaaacgtggtggt
gtggcagaatacattgctgctagttaa
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