Ensifer sp. PDNC004: JVX98_01220
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Entry
JVX98_01220 CDS
T09472
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
enp
Ensifer sp. PDNC004
Pathway
enp03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
enp00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
JVX98_01220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
enp03400
]
JVX98_01220
DNA repair and recombination proteins [BR:
enp03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
JVX98_01220
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Choline_bind_2
Motif
Other DBs
NCBI-ProteinID:
QRY65748
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All DBs
Position
unnamed_1:complement(265207..266091)
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AA seq
294 aa
AA seq
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MAPRASWKGYLKLSLVSCPVRLYPATSSSERISFNQLHKDTHNRINMKPVDPELGLVERS
DLVKGYEYEDKKYIIIEDSDLDSVRIESNHTMNIEAFVDEGSVDVIYQDAPYYLAPDGAM
AEETFVVLREALKKSGKVAIARLVLSSRERVVTIGARETGMFVCTLRNPSEVRGTAEYFG
NVPVGHPDPEMLQLAEALIQQKMTVFDPKNYEDRYEIALMKMIREKLKGHKPIIAAAPER
GNVINLMDALKASLSQSKPPAKSKPKAEPAAKQTSKAAAPAKRTAAKPAAKKKA
NT seq
885 nt
NT seq
+upstream
nt +downstream
nt
atggcgcccagggcaagttggaaaggttacctcaaactcagtctcgtcagttgccccgtc
aggctctatccggcgaccagttcgagcgagcgcatcagcttcaaccagttgcacaaggac
acccataaccggatcaacatgaagccggtcgacccggaactcgggctcgtcgagcgttcg
gatctggtcaagggctacgaatacgaagacaagaagtacatcatcatcgaggacagcgat
ctcgacagcgtcaggatcgagtccaatcacacaatgaacatcgaggccttcgtcgacgaa
ggctctgtcgacgtgatctatcaggacgcgccatactatctcgccccagacggcgcgatg
gctgaggaaaccttcgtcgtgctgcgcgaagcgttgaaaaagagcggcaaggtggcgatc
gcgcgcctcgtgctttcgagccgcgaacgggtggtgaccatcggtgcgcgcgaaaccggg
atgttcgtgtgtacactgagaaacccgagcgaagtgcgcggaacggctgaatatttcggc
aatgtacccgttggtcacccggacccggaaatgctgcaactcgccgaagccttgatccag
cagaagatgacggtcttcgatccgaagaactatgaggaccgctacgagatcgcgctgatg
aagatgatccgcgagaagctcaaaggtcacaagccgatcattgcggcagcccctgagcgt
ggcaacgtcatcaacctcatggatgcgctgaaggcgagcctgtcgcagtcgaagccgcct
gcaaagagcaagcccaaggccgagccggcagcgaagcaaacctccaaggcggcagcgcca
gccaagcgcacggcggcaaaaccggccgcgaagaagaaagcctaa
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