Escherichia coli O7 K1 CE10: CE10_4059
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Entry
CE10_4059 CDS
T01999
Symbol
gadW
Name
(GenBank) transcriptional activator of gadA and gadBC in absence of GadX
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
eoc
Escherichia coli O7:K1 CE10
Brite
KEGG Orthology (KO) [BR:
eoc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoc03000
]
CE10_4059 (gadW)
Transcription factors [BR:
eoc03000
]
Prokaryotic type
Helix-turn-helix
AraC family
CE10_4059 (gadW)
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Gene cluster
GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
AEQ14768
LinkDB
All DBs
Position
complement(4121636..4122364)
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AA seq
242 aa
AA seq
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MTHVCSVILVRRSFDIYHEQQKISLHNESILLLDKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQIPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNDSGVNSPILSKMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtctgctcggtgatcctcgttcgtcgttcattcgatatttatcatgaacag
caaaaaatatcgttgcataacgagagtatcctgctgctggataaaaatttggcagacgat
tttgcgttttgttcaccggatacgcgacgactggatatcgatgagctgacagtttgccat
tacttacaaaatattcgtcagataccacgcaatttagggttacatagcaaagaccgtctg
ttaattaaccagtcaccccccatgccgctggtgacggcgatttttgatagtttcaatgac
tccggggtaaattcgccgatactgagcaaaatgctctacctttcctgtttatcaatgttt
tctcataagaaagaactgatccccttacttttcaatagtatcagtactgtttcaggaaaa
gttgaacgccttattagctttgatatcgctaaacgttggtatctacgcgatatcgcagaa
agaatgtacaccagcgagagtctcatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcctccaggatgtcgatggccagacgattactcgagttacgtcaa
attcctctgcatactattgcggaaaaatgtggatatagcagtacgtcgtactttataaac
acatttcgacaatattatggtgtaacgccacatcagtttgcgcaacattcgccaggtacc
ttttcctga
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