Escherichia coli O103 H2 12009 (EHEC): ECO103_1158
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Entry
ECO103_1158 CDS
T01096
Symbol
ycfS
Name
(GenBank) conserved predicted protein
KO
K19236
L,D-transpeptidase YcfS
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Pathway
eoh01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01503 Cationic antimicrobial peptide (CAMP) resistance
ECO103_1158 (ycfS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
eoh01002
]
ECO103_1158 (ycfS)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
eoh01011
]
ECO103_1158 (ycfS)
Peptidases and inhibitors [BR:
eoh01002
]
Cysteine peptidases
Family C82
ECO103_1158 (ycfS)
Peptidoglycan biosynthesis and degradation proteins [BR:
eoh01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
ECO103_1158 (ycfS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ldt_C
YkuD
LysM
Motif
Other DBs
NCBI-ProteinID:
BAI29997
LinkDB
All DBs
Position
complement(1254121..1255083)
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AA seq
320 aa
AA seq
DB search
MMIKTRFSRWLTFFTFAAAVALALPAKANTWPLPPAGSRLVGENKFHVVENDGGSLEAIA
KKYNVGFLALLQANPGVDPYVPRAGSVLTIPLQTLLPDAPREGIVINIAELRLYYYPPGK
NSVTVYPIGIGQLGGDTLTPTMVTTVSDKRANPTWTPTANIRARYKAQGIELPAVVPAGP
DNPMGHHAIRLAAYGGVYLLHGTNADFGIGMRVSSGCIRLRDDDIKTLFSQVTPGTKVNI
INTPIKVSAEPNGARLVEVHQPLSEKIDDDPQLLPITLNSAMQSFKDAAQTDAEVMQHVM
DVRSGMPVDVRRHQVSPQTL
NT seq
963 nt
NT seq
+upstream
nt +downstream
nt
gtgatgatcaaaacgcgtttttctcgctggctaacgttttttacgttcgccgctgccgtg
gcgctggcgctaccggcaaaagccaacacctggccgctgccgccagcgggcagtcgtctg
gttggcgaaaacaaatttcatgtggtggaaaatgacggtggttctctggaagccatcgcc
aaaaaatataacgtcggctttctcgctctgttacaggctaaccctggcgttgatccttac
gtaccgcgcgcgggtagcgtgttaacgatcccgttgcaaaccctacttccagatgcgccg
cgcgaaggcattgtgatcaatattgcggagctgcgtctctattactacccgccgggtaaa
aattcggtaaccgtgtatccaataggtattggtcagttaggtggtgacacgctgacaccg
acaatggtgaccaccgtttcagacaaacgtgcaaacccaacctggacgccaacggcaaac
atccgcgcccgttataaagcacagggaattgagttgcctgcggtagtgccggctggaccg
gataacccaatgggccatcatgcgattcgtctggcggcctatggcggcgtttatttgctt
cacggtacgaacgccgatttcggcattggcatgcgggtaagttctggctgtattcgtctg
cgggatgacgatatcaaaacactctttagccaggtcaccccaggcaccaaagtgaatatc
atcaacactccgataaaagtctctgccgaaccaaacggtgcgcgtctggttgaagtacat
cagccgctgtcagagaagattgatgacgatccgcagctgctgccaattacgctgaatagc
gcaatgcaatcatttaaagatgcagcacaaactgacgctgaagtgatgcaacatgtgatg
gatgtccgttccgggatgccggtggatgtccgccgtcatcaagtgagcccacaaactctg
taa
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