Escherichia coli O103 H2 12009 (EHEC): ECO103_3287
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Entry
ECO103_3287 CDS
T01096
Symbol
truD
Name
(GenBank) pseudouridine synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
eoh03016
]
ECO103_3287 (truD)
Enzymes [BR:
eoh01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
ECO103_3287 (truD)
Transfer RNA biogenesis [BR:
eoh03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
ECO103_3287 (truD)
Prokaryotic type
ECO103_3287 (truD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
BAI32036
LinkDB
All DBs
Position
complement(3337306..3338355)
Genome browser
AA seq
349 aa
AA seq
DB search
MIEFDNLTYLHGKPQGTGLLKANPEDFVVVEDLGFEPDGEGEHILVRILKNGCNTRFVAD
ALAKFLKIHAREVSFAGQKDKHAVTEQWLCARVPGKEMPDLSAFQLEGCQVLEYARHKRK
LRLGALKGNAFTLVLREVSNRDDVEQRLIDICVKGVPNYFGAQRFGIGGSNLQGALRWAQ
TNTPVRDRNKRSFWLSAARSALFNQIVAERLKKADVNQVVDGDALQLAGRGSWFVATTEE
LAELQRRVNDKELMITAALPGSGEWGTQREALAFEKAAVAAETELQALLVREKVEAARRA
MLLYPQQLSWNWWDDVTVEIRFWLPAGSFATSVVRELINTTGDYAHIAE
NT seq
1050 nt
NT seq
+upstream
nt +downstream
nt
atgattgagtttgataatctcacttacctccacggtaaaccgcaaggcaccgggctgctg
aaagccaatccggaagactttgtggtggtggaagatttgggctttgagcctgatggtgaa
ggtgagcatattctggttagaatcctcaaaaacggctgcaatacccgttttgtggcggat
gcactggcgaaattcctgaaaattcatgcccgtgaagtcagcttcgctgggcaaaaagac
aaacatgctgttacggaacagtggttatgcgctcgcgtgccaggcaaggaaatgcccgat
ctgagcgcctttcaactggaaggctgccaggtgctggagtatgcgcggcacaagcgcaag
ctgcgtttaggcgcgctgaaaggtaacgcctttaccctggttctgcgcgaagtgagcaat
cgcgatgacgttgaacaacgtctgatcgatatttgcgtaaaaggtgtaccgaactacttc
ggtgcccaacgttttgggattggcggtagcaacttgcagggcgcgctgcgctgggcgcaa
accaatactccggtgcgcgatcgcaataaacggagtttttggttgtcggcagcccgcagt
gcgttgtttaatcagattgttgctgagcgcctcaaaaaagcagacgttaatcaagttgtt
gacggcgatgcgctacaattagccggacgtggtagctggtttgtagcaaccaccgaagaa
ctggcggaattacagcgtcgcgtcaacgataaagagctgatgataaccgccgcattgccg
ggcagtggcgaatggggaactcagcgtgaagcgctggcattcgaaaaggcagctgtcgcc
gcagaaactgaattacaagctttactggtgcgcgaaaaagttgaagccgcgcgcagagcg
atgttgctgtatccgcaacaattaagctggaattggtgggatgacgtcaccgtagagatc
cgtttctggcttccggcgggtagttttgcaaccagcgttgtcagggaacttatcaacaca
acaggtgattatgcgcatattgctgagtaa
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