Escherichia coli O103 H2 12009 (EHEC): ECO103_4243
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Entry
ECO103_4243 CDS
T01096
Symbol
gadW
Name
(GenBank) DNA-binding transcriptional activator GadW
KO
K21906
AraC family transcriptional regulator, glutamate-dependent acid resistance regulator
Organism
eoh
Escherichia coli O103:H2 12009 (EHEC)
Brite
KEGG Orthology (KO) [BR:
eoh00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
eoh03000
]
ECO103_4243 (gadW)
Transcription factors [BR:
eoh03000
]
Prokaryotic type
Helix-turn-helix
AraC family
ECO103_4243 (gadW)
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GFIT
Motif
Pfam:
HTH_18
HTH_AraC
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
BAI32948
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All DBs
Position
complement(4331100..4331828)
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AA seq
242 aa
AA seq
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MTHVCSVILIRRSFDIYHEQHKISLHNESIVLLEKNLADDFAFCSPDTRRLDIDELTVCH
YLQNIRQLPRNLGLHSKDRLLINQSPPMPLVTAIFDSFNESGVNSPILSNMLYLSCLSMF
SHKKELIPLLFNSISTVSGKVERLISFDIAKRWYLRDIAERMYTSESLIKKKLQDENTCF
SKILLASRMSMARRLLELRQIPLHTIAEKCGYSSTSYFINTFRQYYGVTPHQFAQHSPGT
FS
NT seq
729 nt
NT seq
+upstream
nt +downstream
nt
atgactcatgtctgctcggtgatcctcattcgtcgttcattcgatatttatcatgaacag
cataaaatatcgctgcataacgagagtatcgtgctgctggagaaaaatttggcagacgat
tttgcgttttgttcaccggatacgcgacgactggatatcgatgagctgacagtttgccat
tacttacaaaatattcgtcagctaccacgcaatttagggttacatagcaaagaccgtcta
ttaattaaccagtcaccccccatgccgctggtgacggcgatttttgatagcttcaatgaa
tccggggtaaattcaccgatactgagcaatatgctctacctttcctgtttatcgatgttt
tctcataagaaagaactgatccccttacttttcaatagcatcagcactgtttcaggaaaa
gttgaacgccttattagctttgatatcgccaaacgttggtatctgcgcgatatcgcggaa
agaatgtataccagcgagagtctcatcaaaaaaaagttgcaggatgaaaatacctgtttc
agtaaaatattactcgcttccaggatgtcgatggccagacgattactcgagttacgtcaa
attcctctgcatactattgcagaaaaatgtggctatagcagtacgtcgtactttataaac
acatttcgacaatattatggtgtaacgccacatcagtttgcgcaacattcgccaggtacc
ttttcctga
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