Emticicia oligotrophica: Emtol_2405
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Entry
Emtol_2405 CDS
T02272
Name
(GenBank) pseudouridine synthase Rsu
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
eol
Emticicia oligotrophica
Brite
KEGG Orthology (KO) [BR:
eol00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
eol03009
]
Emtol_2405
Enzymes [BR:
eol01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Emtol_2405
Ribosome biogenesis [BR:
eol03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Emtol_2405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
S4_2
Motif
Other DBs
NCBI-ProteinID:
AFK03541
LinkDB
All DBs
Position
2495916..2497238
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AA seq
440 aa
AA seq
DB search
MKNNRPRTEEREKSFAKKENTRSGFGEKRREFDSKPSFKKREEGGAKFEEKKRPFGEKKT
FSSERSFQRKDEKPERKSFSGERNFQRRDNTADSQPVRERKVFSDRPKASNDERPFKPFK
KVDDSGRPTSNDRKFAFSPDKPRFQKNEPYKPFKKDKPNRFELKENQANASKGDAPNYDL
ERLKSRLPEKVQRKVQKEEKEAGKDELIRLNRYISNAGIASRRDADELIASGQITVNGKV
VSEMGYKVKPTDVVKYGKKILNREKLVYVLLNKPKDFITTTEDPNERKTVMDLVKNACPE
RIYPVGRLDRNTTGLLLLTNDGELAEKLSHPSNEIKKIYQVELNKPISDEDFDKISNGIE
LEDGFIKPDELAIVTPDAEVVGIKIHSGKNRIVRRIFESLGYEVMKLDRTTYAGLDKKDL
PRSKWRFLTEKEVIRLKYML
NT seq
1323 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaataacagaccaagaacagaagaaagagagaaatctttcgccaaaaaagaaaac
acacgtagtggctttggcgaaaaaagaagagagtttgatagtaagccttcgtttaagaaa
agagaagaaggtggagctaagtttgaggagaaaaaaagacccttcggcgagaaaaaaaca
ttttcaagcgaacgctcatttcagcgtaaagatgaaaaaccagagcgtaaatcgtttagt
ggtgagcgtaacttccaacgccgcgataataccgccgacagccaaccagttagagaaaga
aaagtattttcagatagacctaaagcatctaatgatgaacgtccattcaaaccgttcaag
aaagtagatgatagcggccgcccgacctcaaacgaccgtaagtttgctttttcgcctgat
aagcctcgttttcagaaaaatgagccttataagccattcaaaaaagataagcctaatcgt
ttcgaattaaaagaaaatcaagcgaatgcttcaaaaggcgatgctccaaattatgactta
gagcgtttgaagagtagacttcctgaaaaagtacaacgcaaagtacaaaaagaagagaaa
gaagcaggaaaagacgagttaatcagattgaatcgctatatttcaaacgcaggaatcgcc
tcacgccgtgatgccgatgagcttattgcttctgggcaaattaccgtaaatggtaaggtt
gtgagcgaaatgggttataaagtaaaaccaaccgatgttgtaaaatacggaaagaaaatc
ttgaatcgtgagaaactggtttatgttttattgaataaaccgaaagatttcatcacgact
actgaagacccaaatgagcgtaaaactgtgatggatttagtaaaaaacgcttgtccagaa
cgtatttacccagtaggccgcctcgatagaaatacgacgggtttattgttattgaccaat
gatggcgaattggctgaaaagctttcgcatccttctaacgaaatcaagaaaatataccaa
gtagagctaaataaaccaatcagcgacgaagattttgataaaatctcaaatggtattgag
ttggaagatggtttcattaaacctgatgaattggccattgtaacacctgatgcagaggta
gtaggaatcaagattcatagtggtaaaaaccgtatcgtacgtagaattttcgaaagcttg
ggctacgaagtcatgaaactcgaccgcaccacgtatgctggcctcgataaaaaagattta
ccaagaagtaaatggcgttttttgactgaaaaagaggtgattcgcttgaagtatatgctc
taa
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