Erwinia persicina: CI789_11050
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Entry
CI789_11050 CDS
T05618
Name
(GenBank) L,D-transpeptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
epe
Erwinia persicina
Brite
KEGG Orthology (KO) [BR:
epe00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
epe01002
]
CI789_11050
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
epe01011
]
CI789_11050
Peptidases and inhibitors [BR:
epe01002
]
Cysteine peptidases
Family C82
CI789_11050
Peptidoglycan biosynthesis and degradation proteins [BR:
epe01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
CI789_11050
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
Motif
Other DBs
NCBI-ProteinID:
AXU95719
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All DBs
Position
complement(2359433..2361283)
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AA seq
616 aa
AA seq
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MLLQKSFSTRAVALGCTLFCWMVSMSPSLAGIPPVSAPVSHHVSVVQSASQIAALYPHGN
APFYLKSLAPLYASRSMQPMWQDGQAVQQFQQQLAEVAISGVQPQFIQWVKQLTDPAITG
LARDVVLSDAMLGYLQFTSSVPSKGETWLYSNVPYKMETPSVAVINQWQNALAQGNLNGF
VLSLAPQHPQYARMHQALKTLLAENRPWPQLTDKQTLRPGQVSNDVPALRDILQRTGMMS
PASEPSTPAEEVVGPVDAPLVHDDDNAQPDATARPTTDSSVVVSPSAVPTDNLPPATPQN
VGNVDGVVIPVNSDNIYTPDLVEALKRFQTWQGLEADGAIGTRTREWLNVSPQRRASLLA
LNIQRLRLLPDDMHNGIMVNIPNYSLAYYVNGNEILSSRVIVGRPDRKTPLMRSALNNVV
LNPPWNVPTTLVRKDIVPKVKQDPMYLYKHGYTLLSGWTNDAEVIDPSMIDWSMVSAASF
PYRIRQAPGPTNSLGRYKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNRASDLAS
LLLQNVGWDNSRISSTLKEGDTRFVSIRQRVPVNLYYLTAWVADDGLPQFRTDIYNYDNT
ARSGAPALLSAGQLLL
NT seq
1851 nt
NT seq
+upstream
nt +downstream
nt
atgttgctgcagaaatcgttttccacccgggctgttgcgctgggttgtactctgttttgc
tggatggtcagcatgtcgccatcgcttgcggggataccgccggtctctgcgccggtgagt
catcacgttagcgtggtgcaaagtgcatcgcagattgccgcgctctatccgcacggaaac
gcgccgttctatttgaaaagtcttgctcctctgtatgccagccggagtatgcagccgatg
tggcaggatggtcaggccgtacagcagtttcagcagcagttagccgaagtcgctatctcc
ggcgttcagccacagtttattcagtgggtcaaacagctgaccgaccccgctatcaccgga
ctggctcgtgacgtggtgttgtctgatgccatgctgggctatctgcaatttacttccagt
gttcccagcaaaggggaaacctggctctacagcaatgtgccttataaaatggaaacaccg
tcagtggcggtgatcaaccagtggcaaaatgcgctggcgcaggggaatctgaatggattt
gttctgtcgctggcacctcagcatccacagtatgcgcgcatgcatcaggccctgaaaacc
ctgctggccgaaaaccggccgtggccgcagttgaccgataaacaaaccctgcgtcccggc
caggtcagcaacgatgtgcccgcgctgcgtgacatcctgcagcgtaccgggatgatgtcc
ccggccagcgagccatcgacaccggcggaagaagtggtggggccggttgacgccccgctg
gtgcatgatgatgacaatgcccagcctgatgcgacagcgcgccccacaacggacagcagc
gttgtggtcagtccgtcggccgtaccgactgataacctgccaccggctaccccgcaaaac
gtgggtaacgttgacggtgtcgtgataccggtgaacagcgataatatttataccccggac
ctggtcgaagcgcttaaacgttttcagacctggcaggggctggaagcagacggcgccatt
ggtacgcgtacgcgtgaatggcttaacgtctcaccccagcgccgggcttcattactggcg
ctgaacatacagcggttacgtctgctgccggatgatatgcataacggtattatggtcaat
attcctaattactctctggcctactacgttaatggcaatgagatcctttcttcacgggtg
attgttggccgtcctgaccgtaaaacgcctctgatgcgcagcgccctgaataacgtggtg
cttaacccaccgtggaatgtgccgacaacgctggtgcgcaaggacattgtgccaaaagtg
aaacaggacccgatgtacctgtataaacacggttatacgctgctttccggctggacgaac
gatgcggaggttattgacccgtcaatgatcgactggagcatggtgtctgctgcctcgttc
ccttatcgcatccgtcaggctccggggccgactaattcacttggccgctacaaattcaat
atgccaagttcggatgcgatttatctgcacgacacgccaaatcacggcctgttccagaaa
gatattcgcgcattgagttcaggctgcgtccgggtcaaccgcgcctcagatctggccagc
ctgctgttacagaacgttggctgggataattcgcgtatttccagcacgctgaaagagggg
gatacccgctttgtctccatccgccagcgcgttccagtgaacctctattatctgacggcc
tgggtcgccgatgatggcttgccgcaatttcgtacagatatttacaattatgacaatacc
gcccgatccggcgccccggcgctgttgtcagctggtcagttattgctctaa
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