Agathobacter rectalis M104/1: ERE_05560
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Entry
ERE_05560 CDS
T02588
Name
(GenBank) ATP-dependent nuclease, subunit B
KO
K16899
ATP-dependent helicase/nuclease subunit B [EC:
5.6.2.4
3.1.-.-]
Organism
era
Agathobacter rectalis M104/1
Brite
KEGG Orthology (KO) [BR:
era00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
era03400
]
ERE_05560
Enzymes [BR:
era01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
ERE_05560
DNA repair and recombination proteins [BR:
era03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
ERE_05560
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ADDB_N
PDDEXK_1
Motif
Other DBs
NCBI-ProteinID:
CBK92643
LinkDB
All DBs
Position
515603..519073
Genome browser
AA seq
1156 aa
AA seq
DB search
MSLQFITGNSGNGKTKYLFNRIVKEAKANPRDNYLVIVPEQFTMQTQRQLVDLSENKAIM
NIDVLSFKRLAYRVFDELGITNLTVLEETGKNLVLRKLAAQEADKLGVIGRNLNRIGYIS
EVKSLLSELVQYNISPEELGRYIASGRLSDTLSDKLKDVLVLYEAFEKFMQDKYITAEEI
LNVLSNVAEESAILRNSVIAFDEFTGFTPIQNQLIKKLFVISKKIYVTLTIDCREDIFKS
RGMQELFDMPKRTVKSLTEMAAFYGIEVEEPIILDKNYRLAENEELSFMEQQFFRKRRCS
FKKVPKHIHIDCLRDPKQELTKIARRINELVRNENLRYRDIAIVTGDVNIYAGYVREIFD
KYNIPYFIDATQEILFHPFIEFIRSIPDIAAQNFSADAVFRFLRCGFSELLDSEIDVLEN
YVLACGVRGKSAWDKKWVRLPKHKAGYDIELLNQSREYIMELLKPVYQVFSDKKSTVKDY
VLAIYKLIVLLDIPDKLAKKEQALLDAGDQTASKEYGQIYKIVMQLFEKYVAVLGDECMD
AEEFTQILDAGLDAADVAVIPPGYDTVTIGDIERTRLTNIKVMFFAGVNDGIVPKAAGRG
GIISQYEREALKELDIELAPGAREQAFIQRFYLYLNMTKPSRELYISYTRLDSEKKAAQP
SYLIGILKGMFPELVVTETEDVEQLLDISSRQSALDYLLSNEVDDRWCEIAAAVMLYDAS
VSDAGDGNEVDDKEFTQKNSVERLINARFEHYSKDPISRNVARSIYGRHMEGSITRFEQF
ARCAYAHFLNYGLRLTEREESGFTSLDMGNIYHEALERYSKKLDRESTDWFSVTDAKRDE
LAMEAINEVIDEYAGFGIFDTAESQHSISHMKAVFKQTVWALTTQIRRGSFVPERFEFSF
YESLDMANDVTVDIKGRVDRTDTYTDEGRLFVKVLDYKSGNTVFDLVKLYYGTQLQLAVY
MDAVMEQKKEALKQVSVEPGGMLYYHIDDPVIDLKDVTPGTELSEEEINQMILKKLKPDG
LINSDEKAYRGMDRDFEKSSDVIPVTLKKDQTPAAGSKVANAEEFDVITRFAREKLREIG
REIYDGNVAVNPIKNKKIDSCAYCAFQAICRYDSRIPGFSERSFNGDNKEDVLDKMRTQI
AAAEHKACYGDNNIKP
NT seq
3471 nt
NT seq
+upstream
nt +downstream
nt
atgtcattacagtttatcacaggtaattcaggaaacggaaaaacgaaatatctctttaac
aggatagtgaaagaggcaaaggcaaacccaagggacaattatcttgtaatagtgcctgag
cagtttacaatgcagacgcagagacagcttgtagatttgtcggagaataaagctatcatg
aatatagatgtgctaagttttaagcgcttagcctacagagtgtttgatgagcttggaatc
acaaatctcacggtgcttgaggagacaggtaagaaccttgtactcagaaagcttgcggca
caggaggcggataagcttggcgtaataggcagaaacttaaaccgcatcggctatataagt
gaggtaaagtcactgctttcggagcttgtgcagtacaatatatcacctgaggagctcgga
agatatattgcctcaggcaggctatcggatacactttcagataagctcaaggatgtgctc
gtgctctacgaagcatttgagaagtttatgcaggacaaatatatcactgcagaggaaata
cttaatgtgcttagcaatgtggcggaggagtctgccattcttagaaattcagtcattgca
tttgatgaatttaccggatttacacctatacagaaccagctcatcaaaaagctctttgtc
atttcaaagaaaatatatgtaacgctcacaatagactgtcgtgaggatatctttaagagc
agaggcatgcaggaactgtttgacatgccaaaaaggacagtgaaatcactcaccgaaatg
gcagcgttttatggcatagaagtcgaggaacctattatccttgataaaaactaccggctt
gcagaaaacgaagagctaagctttatggaacagcagtttttcagaaaacgaagatgctcc
tttaaaaaagtaccaaagcacattcatatagactgtctgcgtgacccgaagcaggagctg
acaaagatagccagaagaattaatgagcttgtaaggaacgaaaatctgcgttaccgagat
attgctatagtcacaggagatgtgaatatatatgcaggttatgtgcgtgaaatatttgac
aaatacaatattccttactttatcgatgccacacaggagatacttttccatccgtttatt
gagtttatcaggtcaatacccgatattgcggcacaaaatttctcggcagatgcggtgttc
agatttttgcggtgcggctttagtgagctattggacagtgaaatagatgtacttgaaaac
tatgtgctcgcctgtggagtaagaggtaaaagcgcatgggacaaaaagtgggtcaggctg
ccaaagcataaggcaggctatgacattgagcttttaaaccaaagcagggagtatataatg
gagttgctcaagccggtatatcaggtgttttccgataaaaagtcaacggtaaaggactat
gtgctcgctatatataagctgatagttttgcttgatatacctgataagcttgcaaaaaag
gagcaggcactgcttgatgcaggggaccagaccgcatcaaaggaatacggacagatatac
aaaatagtcatgcagctctttgaaaaatatgtggcggtgctgggtgatgaatgcatggat
gcagaggaatttacacagatactggatgcaggactggatgcggcagatgtagcagtcata
ccgccgggatacgacactgtgaccatcggagatattgagagaacgcgtctgaccaacata
aaggtcatgttttttgcaggcgtaaacgatgggattgttccaaaggcggcaggaagagga
ggcattatatcccagtatgagagagaggcacttaaggagctggatatagagcttgcgccc
ggggcaagggagcaggcatttatacagaggttttatctgtatctgaacatgacaaagcca
tccagggaactttatatcagctatacgagacttgacagtgaaaaaaaggctgcccagcca
tcgtatctcataggtatattaaaggggatgtttccggagcttgtcgtgactgagacagag
gatgtagaacagcttttggatatatcaagcaggcagagtgctctggattatctgttgtca
aatgaggtggatgacagatggtgcgagattgcagcagcggtgatgctctatgacgcatca
gtcagtgatgcaggggacggtaatgaagtagacgataaagaatttactcaaaaaaattcc
gtggagaggctcataaatgcaaggtttgagcattattcaaaggatccgatcagccgaaat
gtggcaagaagcatatacggcagacacatggagggcagtatcacgcgctttgagcagttt
gccagatgtgcatatgcgcattttttaaattatggattgaggcttacagagcgtgaggag
agcggctttacatcccttgatatgggtaatatataccatgaagcactggaaagatacagt
aagaagcttgatagggagagtactgactggtttagcgtgacagatgcaaaaagggatgag
cttgcgatggaagcaataaatgaggtgattgatgagtatgcaggctttggcatatttgat
acagcggaaagccaacattcgatatcacatatgaaggcggtctttaagcagacagtatgg
gcactcacaacccagatacgaagaggcagctttgtgcctgagaggtttgagttttctttt
tacgagagccttgatatggcaaatgatgtgacggttgatataaagggacgcgtggacagg
actgacacatatacggatgagggcaggctttttgtgaaggtactggattacaagtcggga
aatacagtttttgacctggtgaagctgtactatggcacgcagcttcagcttgcagtgtac
atggacgccgtcatggaacaaaagaaagaggcgctaaagcaggtaagtgtggagccgggc
ggtatgctgtactatcacatcgacgatcctgtaattgatttaaaggacgtgacaccgggc
actgagctgtctgaggaagaaatcaatcagatgatattaaagaagctcaagcctgacggg
cttatcaactcggacgaaaaggcatacagaggcatggacagggactttgagaaaagctct
gacgtaatccctgtcaccttaaaaaaggatcagacaccggctgcaggctcaaaggtggca
aacgccgaagagtttgatgtgataacaaggtttgcgcgagagaagcttcgcgagatagga
agagaaatatacgatggaaatgttgccgtcaatcctatcaagaacaagaaaatagacagc
tgcgcatattgcgcttttcaggccatatgcaggtatgattcaaggataccgggctttagc
gaaagaagctttaacggtgacaataaggaagatgtacttgataaaatgcgtacacagatt
gcagcggcagagcataaagcatgctatggagataataatataaagccataa
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