KEGG   Eremothecium cymbalariae: Ecym_2804
Entry
Ecym_2804         CDS       T02237                                 
Name
(RefSeq) Hypothetical protein
  KO
K12196  vacuolar protein-sorting-associated protein 4
Organism
erc  Eremothecium cymbalariae
Pathway
erc03250  Viral life cycle - HIV-1
erc04144  Endocytosis
Brite
KEGG Orthology (KO) [BR:erc00001]
 09120 Genetic Information Processing
  09125 Information processing in viruses
   03250 Viral life cycle - HIV-1
    Ecym_2804
 09140 Cellular Processes
  09141 Transport and catabolism
   04144 Endocytosis
    Ecym_2804
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04131 Membrane trafficking [BR:erc04131]
    Ecym_2804
   03400 DNA repair and recombination proteins [BR:erc03400]
    Ecym_2804
Membrane trafficking [BR:erc04131]
 Endosome - Lysosome transport
  Endosomal sorting complexes required for transport (ESCRT)
   ESCRT-III complex
    Ecym_2804
DNA repair and recombination proteins [BR:erc03400]
 Eukaryotic type
  Check point factors
   Other check point factors
    Ecym_2804
SSDB
Motif
Pfam: AAA Vps4_C MIT AAA_lid_3 AAA_16 RuvB_N AAA_5 AAA_14 AAA_22 RNA_helicase TIP49 DUF815 IstB_IS21 AAA_18 AAA_2 AAA_17 AAA_25 AAA_33 AAA_24 nSTAND3 DUF5906 Parvo_NS1 AAA_7 Mg_chelatase AAA_28 Torsin PhoH NACHT bpMoxR Use1
Other DBs
NCBI-GeneID: 11468574
NCBI-ProteinID: XP_003645318
UniProt: G8JQD8
LinkDB
Position
2:complement(1561704..1563005)
AA seq 433 aa
MSTGDFLNKGIELIQKAIDFDTATQYQDAYTAYYNGLDYLMLALKYEKNPKSKDLIRVKF
TEYLNRAEQLKDYLETEEDKVKNKPKRTAAASTDSGNGSGSEHDDDGEDKKLRGALSGAI
LTEKPNVRWEDIAGLEGAKEALKEAVILPVKFPHLFRGNRKPTSGILLYGPPGTGKSYLA
KAVATEANSTFFSISSSDLVSKWMGESERLVKQLFNMARENKPSIIFIDEVDALTGSRGE
GESEASRRIKTELLVQMNGVGNDSTGVLVLGATNIPWQLDSAIRRRFERRIYIPLPDLAA
RTKMFELNVGETPCTLTKEDYRTLGQYTDGYSGSDIAVVVKDALMQPIRKIQMATHFKNV
SKDPNKHKLTPCSPGDKDAVEMSWTDIDADELLEPGLTIKDFLKAIKTSRPTVNDEDLKK
QQEFTKDFGQEGN
NT seq 1302 nt   +upstreamnt  +downstreamnt
atgagcaccggtgattttctaaataaaggcatcgagttgattcagaaggccattgatttt
gatactgcgacacagtaccaggatgcttatacggcatattacaatgggttagattattta
atgcttgcactaaaatatgagaaaaatccgaagtctaaagatttaattagggtgaagttt
actgaatatttgaatagggcggaacagttgaaggattacttagaaactgaagaagataaa
gtgaaaaataaacctaaaagaacggctgcagcttctactgatagtggtaacgggtctgga
tccgaacatgatgatgatggtgaggataagaagttgcgaggagcattatctggagccatt
ttgacagagaagcctaatgtaagatgggaggacattgcaggattggagggggccaaagaa
gcattgaaagaggcagttattttgcctgtaaagtttcctcatttattcagggggaataga
aagcctacctctgggattttgttatatggtcctccaggaacgggtaaatcttatctagct
aaagcagtggctacggaagccaactcaacgttcttcagcataagctccagtgatttggtg
tctaaatggatgggcgaatcagagagactagtgaaacaattgttcaatatggcaagagaa
aacaagccttctattattttcatcgacgaagtcgatgcattaactggatctagaggagaa
ggtgaaagcgaggcaagtcgaagaattaaaactgaattgttagttcagatgaatggtgtg
ggaaatgattcgaccggtgtactagtattgggtgctacaaatataccttggcaattggac
agtgctattagaagaaggtttgaaaggagaatctatattcccttgccagacttggccgca
agaacaaagatgtttgagttgaatgttggcgaaacaccgtgtacattgaccaaagaagat
tatagaaccttgggtcagtatacggatggttattccggtagcgatatagctgttgttgtg
aaggacgcattaatgcaaccaattaggaaaattcagatggctactcattttaaaaatgtt
tctaaggatcctaacaagcataaactaactccatgttctccgggtgataaagatgccgta
gaaatgagttggacagatatcgacgctgatgagttattagaacctggtttaactattaaa
gatttcttgaaggctataaaaacttcaaggcctacggtgaatgacgaagacctaaagaag
caacaagaattcaccaaagatttcgggcaagaaggtaactaa

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