Agathobacter rectalis ATCC 33656: EUBREC_2280
Help
Entry
EUBREC_2280 CDS
T00909
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing)
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
ere
Agathobacter rectalis ATCC 33656
Brite
KEGG Orthology (KO) [BR:
ere00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
ere03032
]
EUBREC_2280
03400 DNA repair and recombination proteins [BR:
ere03400
]
EUBREC_2280
Enzymes [BR:
ere01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
EUBREC_2280
DNA replication proteins [BR:
ere03032
]
Prokaryotic type
DNA Topoisomerases
EUBREC_2280
DNA repair and recombination proteins [BR:
ere03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
EUBREC_2280
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
TOPRIM_C
Motif
Other DBs
NCBI-ProteinID:
ACR76019
UniProt:
C4ZD56
LinkDB
All DBs
Position
complement(2139548..2141470)
Genome browser
AA seq
640 aa
AA seq
DB search
MAKKQTYDEKSIAILEGLEAVRKRPGMYIGSVTTKGLNHLIYEIVDNSVDEHLAGACDTI
RVTLEKNGSCTVEDNGRGIPVGMHAKGVSAARVVFSTLHAGGKFDNSVYKTSGGLHGVGS
SVVNALSTYMDVEISRDGYIHHDRYEKGVPVVELENGLLPTLGKTKKTGTKINFLPDPEI
FEKTRFREEDVKNRLKETAYLNPKLTIIYEDKRGDATEHIEYHEPEGIVGFVKDLDKNIE
KLHDVIYFTGESENIKVEVAFQYTSEFHENILGFCNNIYNSEGGAHITGFKTAFTGIINS
YARELGILKDKDANFNGADVRNGMTAVVSVKHPDPRFEGQTKTKLDNQDANRATAKVTND
EVPLYFDKNLEVLKTVISCAEKAAKIRKAEEKAKTNLLTKQKFSFDSNGKLANCESRDAS
KCEIFIVEGDSAGGSAKMARNRMFQAIMPIRGKILNVEKASIDKVLANAEIKTMINAFGC
GFSEGYGNDFDITKLRYDKIIIMADADVDGAHISTLLLTLFFRFMPELILEGHVYVAMPP
LYKAIPSKGEEKYLYDDAELDKYRKTHTGKFTLQRYKGLGEMDADQLWDTTLNPATRMLK
RIEIEDGRLANDVTSLLMGSDVPPRKEFIYEHAHDAELDV
NT seq
1923 nt
NT seq
+upstream
nt +downstream
nt
atggccaagaagcaaacatacgatgagaaaagcatagcaattttagaaggacttgaggca
gtcagaaaaagaccgggtatgtatataggaagtgtcacaaccaagggactaaaccatctg
atatatgagattgtggacaactccgtagatgagcatctggcaggtgcctgtgataccata
agggtaactcttgagaaaaacggttcgtgtacggtggaggataacggacgtggaatacct
gtaggtatgcatgctaagggggtatctgcagcgcgtgttgtattctcgacactgcacgca
ggaggtaaattcgacaattctgtatataagaccagtggaggtctgcacggagttggttcg
tcggttgtaaatgcattatccacatatatggatgtggagataagcagagatggctatatc
caccatgacagatatgaaaagggtgttcctgtcgtggagcttgaaaatggcctgcttcct
actttaggcaaaaccaaaaaaacaggaacaaagattaatttcctgccggatccggagatt
tttgagaagacaagattcagggaagaggatgtaaagaacagactgaaggagactgcatat
ctcaatccgaagcttacaatcatatacgaggacaaacgaggtgatgcgacagagcatatt
gagtatcatgagcctgagggtattgttggttttgtaaaggatttggataaaaatattgaa
aagctgcatgatgtcatttactttacaggagagagtgagaatataaaggttgaggtggct
tttcagtatacaagcgagttccatgagaatattctaggtttttgcaacaatatatacaat
tctgagggtggagcgcatatcacaggctttaagactgcgtttacaggtattatcaattca
tatgccagagagcttggtatattaaaggacaaggatgcgaatttcaacggagcagatgtc
agaaacggcatgactgctgtagtgtcagtaaagcatcctgaccctagatttgagggtcag
acaaagacaaagcttgacaatcaggatgcaaaccgtgcaactgccaaggtgacaaatgat
gaggtaccgctttattttgacaagaatcttgaggttttaaagacggtaatatcatgtgct
gagaaggccgcaaagattagaaaagctgaggagaaggcaaagaccaatctgctcacaaag
cagaagttttcctttgattcaaacggaaagcttgcaaactgtgagagcagggatgcttct
aagtgcgagattttcatagtcgagggagattcggccggaggctcggcaaagatggcaaga
aaccgtatgtttcaggcaatcatgccgattcgaggcaagattttgaatgttgaaaaggca
agtattgataaggtactggcaaacgctgaaataaagacaatgataaatgcgtttggctgc
ggattttcggaagggtatggaaatgattttgatataacaaagcttcgctatgacaaaatc
atcattatggccgatgctgatgtggacggagctcatatctccacactgcttttgactctg
ttcttcaggtttatgcctgagcttattttagagggacatgtatatgttgccatgcctccg
ctttacaaggctattccgtcaaagggcgaggaaaaatatttgtatgacgatgcggagctt
gacaagtacagaaagacacatacaggcaagtttacgttgcaaagatataagggtcttgga
gagatggatgcggatcagctctgggataccacactaaatcccgcaacaaggatgctaaag
cgtattgaaatagaggatgggcgcctggcaaatgatgtgacatcactgcttatgggtagt
gatgtgccaccgagaaaagagttcatatacgagcatgcgcatgacgcggagctggatgtg
taa
DBGET
integrated database retrieval system
