Erysipelothrix piscisicarius: EEI45_05340
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Entry
EEI45_05340 CDS
T05733
Name
(GenBank) DEAD/DEAH box helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
eri
Erysipelothrix piscisicarius
Brite
KEGG Orthology (KO) [BR:
eri00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
eri03019
]
EEI45_05340
03009 Ribosome biogenesis [BR:
eri03009
]
EEI45_05340
Enzymes [BR:
eri01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
EEI45_05340
Messenger RNA biogenesis [BR:
eri03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
EEI45_05340
Ribosome biogenesis [BR:
eri03009
]
Prokaryotic type
rRNA helicases
EEI45_05340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
Flavi_DEAD
UvrD-helicase
PRAI
Motif
Other DBs
NCBI-ProteinID:
AZK44248
UniProt:
A0A3Q8S7M4
LinkDB
All DBs
Position
1052075..1053415
Genome browser
AA seq
446 aa
AA seq
DB search
MMNNINKRFFELNKFKDLTSVQEKVLKEIKTKRDLIVKSDTGTGKTHAFLFAILELIDPT
VEQTQALILAPTRELAMQIQSFAREITTLDERITTELAIGGMDNSRLKKKIEKQPMILIT
TPGKFIDILGWSVLRLDFIKTFVIDETDMMLDYGFINEVDTIASRLSNDTIFMLYSATIP
SGLRAFIKKYLKHPIEIVSTEEKLKPRIDHILINQRHRDMNEAVLDVLSAINPLLAVVFA
NTKVQAGEIARYLRDYGIECVELHGDVSDRGRKQVLNQINSKRVQYIVATDLAARGIDLP
EISHVINAGLPNHDLDFYTHRSGRTGRSGRQGYSISIVTQKDQGAVTRLMKKGLRFEYKR
VKDVGLEDVRPWFNLEKRTKQLDPEIVQVLHRKNVKVKPGYKVKRKREIERLTNKKKRNM
IQQEIREQKKERAKAKQRERALDTEK
NT seq
1341 nt
NT seq
+upstream
nt +downstream
nt
atgatgaataatattaataaaagattttttgaactgaataaatttaaagatcttacatca
gttcaagaaaaagttcttaaagaaattaagactaagcgtgatttgattgttaaatcggat
accggtacagggaaaacgcatgcgttcttattcgctattttggaacttattgatccaacg
gtagaacaaacacaggctttaattcttgcaccaacgcgtgaattagcgatgcaaatccag
agctttgcacgtgaaattactactttagatgaacgcattacgaccgaacttgcaattggt
ggtatggacaatagccgtcttaaaaagaaaattgaaaaacaaccgatgattttaatcacg
acacctgggaaatttattgatattttaggttggagtgttctaagactcgatttcatcaag
acttttgttatagacgaaacagatatgatgttagactatggatttatcaatgaagttgat
acgattgcatcaagattatcgaatgatacaatttttatgctttacagtgcgacaattcca
agtgggcttcgtgcattcattaaaaagtatctaaaacaccctattgaaatcgtttcaaca
gaagaaaaattgaaaccaagaattgatcatattctcattaatcaacgtcatcgtgatatg
aatgaagcagtccttgacgttttatcagcaatcaatccattacttgctgttgttttcgcc
aacactaaagtacaagcaggggaaattgctcgatatcttcgtgattatggaattgagtgt
gtagagttacatggtgacgttagtgaccgtggccgtaaacaggtattgaatcaaattaac
agcaaacgtgttcagtacattgttgcgactgatttggctgctcgaggtattgatttacct
gaaatcagtcatgtcattaatgcagggttaccaaaccatgatttagatttctatacgcac
cgatcaggccgaactggtcgaagtggtcgacaaggatacagtattagtattgttacccaa
aaagatcagggtgcggtaacgcgattgatgaaaaaaggtttacgttttgagtataaacgc
gttaaagacgtaggtcttgaagatgtccgtccttggtttaacctcgaaaaacgtaccaaa
caactcgatccagaaattgtccaggtgcttcatcgtaaaaacgtgaaggttaagcctggt
tataaagttaagcgtaaacgagaaattgaacgtttaacaaataagaaaaaacgtaatatg
attcaacaagaaattcgagaacagaaaaaagaacgtgcaaaagcaaaacaacgcgaacgt
gcactcgacactgagaagtag
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