Enterobacter roggenkampii DSM 16690: BFV67_03755
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Entry
BFV67_03755 CDS
T05556
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
ern
Enterobacter roggenkampii DSM 16690
Brite
KEGG Orthology (KO) [BR:
ern00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
ern03016
]
BFV67_03755
Enzymes [BR:
ern01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
BFV67_03755
Transfer RNA biogenesis [BR:
ern03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
BFV67_03755
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
JmjC
Motif
Other DBs
NCBI-ProteinID:
AOP94335
LinkDB
All DBs
Position
complement(818352..818906)
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AA seq
184 aa
AA seq
DB search
MPESKRLFFAIELPTPLQRQIVRWRADHFPPEAGRPVAAANLHLTLAFLGDVSAEKQRAL
AAMAGRIAQPEFTLHLDDAGQWLRSRVVWLGTRQPPRGLLQLANMLRAQAARSGCYQSPQ
PFHPHITLLRDAGQAVAIPPPGFHWAFQVNTFALYESVFIQGRTRYTPLQRWTLGDTERN
SDEV
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagtcgaaacggctgttttttgccattgaattgcccacccccttacagcgtcaa
attgttcgctggcgcgctgaccacttcccgccggaggccggacgccctgtcgcggcggcc
aacctgcacctgacgctggcctttttgggcgacgtcagtgccgaaaaacagcgggcgcta
gccgccatggcagggcgtattgcccagccggaatttacgctgcacctcgacgacgcgggc
cagtggctgcgttcgcgcgtggtctggctgggtacgcgacagcctccgcgcggattatta
cagctggcgaacatgctgcgcgcgcaggcggcgcgcagcggctgttatcaaagcccacag
ccgtttcatccgcacatcaccctgctgcgcgatgccggtcaggccgttgccatcccgccg
ccgggttttcactgggcctttcaggtcaacacattcgcgctttatgaatccgtctttatt
cagggacgcacccgctatacgccgctacagcgctggacgctgggcgacaccgaaaggaat
tctgatgaagtttag
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