Erwinia rhapontici: LJN55_07885
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Entry
LJN55_07885 CDS
T08392
Symbol
sdiA
Name
(GenBank) transcriptional regulator SdiA
KO
K07782
LuxR family transcriptional regulator, quorum-sensing system regulator SdiA
Organism
erp
Erwinia rhapontici
Pathway
erp02020
Two-component system
erp02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
erp00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LJN55_07885 (sdiA)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LJN55_07885 (sdiA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
erp03000
]
LJN55_07885 (sdiA)
Transcription factors [BR:
erp03000
]
Prokaryotic type
Helix-turn-helix
LuxR family
LJN55_07885 (sdiA)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autoind_bind
GerE
Sigma70_r4_2
HTH_20
HTH_23
Sigma70_r4
Retrotran_gag_3
HTH_38
Motif
Other DBs
NCBI-ProteinID:
UDQ81745
LinkDB
All DBs
Position
1667029..1667751
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AA seq
240 aa
AA seq
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MTSENYFSWRNRMQLAFGTGSNTAHITRIIEQQAGELEFDFYALFIRHPVPFTRPKTFFY
SNYPQKWIEYYLHEDLVQRDPVMKKCRSPGAMWLWGGDLLPEEQCVLQAAREHGIYHGIS
CSVMAKNRSVGILSLSSANPSKMIALTTELELKLQYISELSMAALIEMDDISMLATKLEL
SERELEILKWTAEGKTSAEISLILSISENTVNFHQKNMQKRFNAPNKTQIASYAAAIGLI
NT seq
723 nt
NT seq
+upstream
nt +downstream
nt
atgacatctgagaactatttcagttggcgaaacaggatgcaattggcttttggtacggga
agcaacaccgctcatattaccaggataattgagcaacaggcgggggagctggaattcgat
ttttatgctctttttattcgtcatcccgttccttttacccggccaaaaacttttttttac
agtaattatccgcagaagtggattgagtattatttgcatgaagacttagtgcagcgcgat
cctgtgatgaagaagtgccgttcaccgggagcgatgtggttgtggggaggcgatctgctc
cccgaggagcagtgcgttctgcaagctgccagagaacatggtatttatcacggtatttct
tgttccgtgatggcgaaaaacagatccgtaggtatattatcgctgtcgtctgccaatcct
tctaaaatgatagcgttaacgacagaacttgaacttaaacttcagtatatttcggagctg
tcaatggctgcattgatcgaaatggatgatatttcgatgctggcaacgaaactggaatta
agtgaaagagaactcgaaattctcaaatggaccgcagagggaaaaacatcggcagaaata
tcactgatcctctctatctcagagaataccgttaattttcaccaaaaaaacatgcaaaaa
cgatttaatgcaccaaacaaaacgcaaattgcctcttatgccgcagcaatcggtttaatc
tga
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